SimpleSearch - Line and FST details


Line specific information

 
Line ID 480G06
Vector Used pAC161
Line Availability available as T3 set from NASC (N446062)
Segregation Analysis 50:26:19
Confirmed for Hit At4g27720
Parent of DUPLO pair none
Parent of pair(s) 477, 3044

Gene hit At4g27720

 
Sequence (A. th genome BLAST matches underlined) 
>47-K019791-022-480-G06-8409
ATGCATGAGACAAATGGCGCACCAGGCCCAAGAGAGAAGGTATCAACTAGCAGGTTCCCA
AACAATCCAGCGATAATTGCAACGAGACCGTTGCCAAAAAACACTGCCTTTGAAAATGTC
ACAGACAGCCATTGCTGCTCAAAGCCCCTCTGCATACATCACGAATAAAAACACTAAGTT
TATAAATAAACATGGCAGCTTAAGAGCTTAATACAGCATAAACCTTTCTTTACCTTATTG
TGCTCAGCAGCTATGGGATCCTCCNTATAGTGAGANCCNNNGNNNCCNCCCCNNNNNNNN
CNNCNNNNACGCCCACCCCCCCNNNCNGCCCCCCCCNCCCCGCGCGCGGGCGGGGGCGGC
GGGGCGGCGGGGGGGGGGCGGCGGNCCCCCCGCGCGGGGGCGGNGGGCGGCNCCGGGGGG
CGGGACNCGGGGGGGGCGCGGCCGCCCGGGCGCGGCGGGGCGGGGGGGGGCGGCGAGAAN
GAGCGAGGAGGACCGGAGGGAGCCCGGAGGCGCCGAGGGACAGGGCGGACGAAAAACGAG
AGGCGCGGACGAGCCCCCACAGGAAAAAGGGACGAGACGAAGAAAANGAAGAGAACAAGA
GAGCGGCGCCACCGGACCAAAGCGGAGACGGCGGCGCAAGCGGCAAGGGAAGAGAACCGA
ACGAAACGGAGAAAACAAGGACACAGAAAGAAACAGCCCGACGCGACGAGCCCGAAAACG
AGCGCGAAAAACCGACGCGGAGCCCAACCCCAGCGNACGAAACAGAACAGAGCCAAAANC
AAGCGCGCCCCCACCCCTGGGCCAAAGCCACCACTAAACC
GenBank Accession BX531482 [GenBank]
Graphic View Graphic view of gene At4g27720
Predicted Position of Insertion Chr4:13832365 - go to primer design
BLAST e Value 1e-127
Hit Clone Code (BAC ID) T29A15
Hit Gene Code At4g27720 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Major facilitator superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX531482 [GenBank]


Last Updated on 10.06.2021 13:37