SimpleSearch - Line and FST details


Line specific information

 
Line ID 480G12
Vector Used pAC161
Line Availability available as T3 set from NASC (N446068)
Segregation Analysis 50:30:24
Confirmed for Hit At5g10100
Parent of DUPLO pair none
Parent of pair(s) 5565, 5646, 5678, 5699, 5726, 93651, 93652, 93653, 93654

Gene hit At5g10100

 
Sequence (A. th genome BLAST matches underlined) 
>95-K019791-022-480-G12-8409
AACCAAGCTCTACCAGAACGACAACATCATCGATGGCGGCGGACAAAGAATCAACGCTTG
GGTAGATTCAATGCGTGCTTCTTCTCCTACTCATCTCAAATCTCTTCCTTCTTCTATCTC
CACACAGCAACAACTCAACTCATGGATCGTAAGTGTTTTCAATAGTCTCTCACAAACTCC
TGATAAGTCTTCCTCTTACATTTTTTCTTTCTTTCTTGTGTGTTTTACGACAGATGCAAC
ATCCTTCAGCGCTATGGGATCCTCCTAATAGTGAGATCTACTGAATCCTCCCCTTAGAGA
GGGACGTGAATGTAGACCCACTATGGGATCCTCC
GenBank Accession BX531490 [GenBank]
Graphic View Graphic view of gene At5g10100
Predicted Position of Insertion Chr5:3158040 - go to primer design
BLAST e Value 4e-118
Hit Clone Code (BAC ID) T31P16
Hit Gene Code At5g10100 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX531491 [GenBank]


Last Updated on 10.06.2021 13:37