SimpleSearch - Line and FST details
Line specific information
| Line ID | 481D05 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N446121) |
| Segregation Analysis | 50:22:17 |
| Confirmed for Hit | At3g03180 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 993, 53315, 89756 |
Gene hit At3g14540
| Sequence (A. th genome BLAST matches underlined) | >36-K019885-022-481-D05-8409 TGATCTGAGATTTCCNGGACATGAAGCCATTTACATTGAATATATCCTGGAAGGCGTGTC CCTGTCTAAACCTTCTTTGCCTTTCTTTCTTTCTTTTTGTGTGCGAATTGACCACTATCC AATTATGAAGCTTAACATGGCATTTAGAGTTCTTAACACTCTCTATGGGATCCTCCCTAT AGTGAGAAATCTCTATCTCTAACTGGCATTAACTTCGTTCCATGTCACCATACAACAGAG ATTGTGAATATCATGGTCTGCATTCAACAAGAACCACATCGGGTCAACTGTGGTTTTTGT CTGGAATTCGTTCTTGCTGCTGCTTCAATAACAAAAATTCAGATCTTTATACTCTGTTTT GGGTGAATAAAACCCATAAGCTAAACTTGCGCTCACGTTTTAGTTCTGATCATCTGAATC CTTACGCTACGATTTAGTTCCTATGAGCAAATCTTATTGATATTTTTCGAACATTACATT ATTAAGATTCAAAAACATAATACAACTTGAAAACAAATGAGAGAGATGATCACACGGCAT ATATGATTTATAAGAAACAAGACCATAGATCTAAGTAAAAGGACTTGTTAGGAGATTGAT GCATTGAGGATATGATCAGTCCATTCAGTTGTGTCTGCAAGCGATGTATCTATGGG |
| GenBank Accession | BX531543 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr3:4884188 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | MIE1 |
| Hit Gene Code | At3g14540 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Terpenoid cyclases/Protein prenyltransferases superfamily protein |
| Insertion Classification | Promoter |
| Confirmation Status | unknown |
Gene hit At3g03180
| Sequence (A. th genome BLAST matches underlined) | >36-K019880-022-481-D05-8409 TATCATGTAGATTTCCGGACATGAGCCATTTACATTGAATATATCCTGGAAGGCGTGTCC CTGTCTAAACCTTCTTTGCCTTTCTTTCTTTCTTTTTGTGTGCGAATTGACCACTATCCA ATTATGAAGCTTAACATGGGCATTTAGAGTTCTTAACACTCACTATGGGATCCTCCCTAT AGTGAGTAAAGGAAAGACATGAGTCAGCAAATCAAAACTATGGGATCCTCCCTATAGTGA GACNTGGAGTATGAGGAGAAGAATTCCACCTGACGAGCACGAGGAACCCTTATGATTCTG GAAGCAAATCGAACATACGGCATGCCTACACAACCAACAAGAAACCCTATCCAAATGATA TAGTATTCTGAATGCATATCAACAAGATGGATGATCGGATTAATAATCAGCCTCCTGTAG CCAGCACCAAGGATTCATGACAGAAGCTTAAAATTCTGCCGTATAGTAACGAACTGGACT GCTGAGTAGACTCCAATGTATAGAGACTCACCAGCTAAGAAGAGGATCGGTCCCACGAGA CCACATGATACCCTTAAGACGCCATGCTAAAATCATAAAGAACGACTCGAAAGATGGTAT AAGTATACCTACGTTCCCCATGGCTATCAGTCGCTTGTGCAACACAAGTATCATTCCCAG GAATGCAAAGAAACACCCCAATTCCAGGCAAACCTA |
| GenBank Accession | BX531542 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr3:734311 - go to primer design |
| BLAST e Value | 3e-66 |
| Hit Clone Code (BAC ID) | T17B22 |
| Hit Gene Code | At3g03180 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Got1/Sft2-like vescicle transport protein family |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
|
Last Updated on 10.06.2021 13:37 |
gabi-kat.de 
