SimpleSearch - Line and FST details


Line specific information

 
Line ID 481G03
Vector Used pAC161
Line Availability available as T3 set from NASC (N446155)
Segregation Analysis 50:24:19
Confirmed for Hit At3g18780
Parent of DUPLO pair none
Parent of pair(s) 5251, 5421, 7529, 10287, 86120, 86130, 86139, 86150, 86151, 86152, 86153

Gene hit At3g18780

 
Sequence (A. th genome BLAST matches underlined) 
>23-K019885-022-481-G03-8409
TGATCCTGAAATTTCCGGACATGAAGCCATTTAAATTGAATATATCCTGACCATGCCTAT
CGTGAGAATCTTCGTGATAGACAATCTTGTTCTTATCATCGATATTGCTATCAGACACCA
TGCTCATACGATACTGCAAAGTAACAATCACCTCTCTTGGATTGAGCATCATCACCGAAA
TATCGCATCCTTCTGGTACATTCCAACCATGACGCCGTGATGTCTTGGCCTACCTACAAC
GCTGAGGAATCAACCACCTGGGACCATTCATCTCCTGCAAAGACAGCCTTCGCCATACCC
GCACCATTGTTCACACTATATTGGCAGAATATCGACAGACTCATGCATTTTGTATGACCT
GGAGGCACCCAAATATAACTCAATAGAGGAAAATAAACCCTGATCGAATCACAAATAGAT
ATGTGTTCAACGATACGACACTACAAATCCTAAAGTTTCGAGGAATCTATAGACGAACAT
CATCTACCCTTAGACAGTGAGCCGATTCAGACTAACATTGACAGGGTCCACATTCTATCT
AACTACAACAGTTCAGATCTCAATTCGCATATACGAATCATTGCCCAGGGAACATGAACA
TGGATTCCCCCCCNNAAGGGGCAAGCCCAAATTCTGGTAGCTATAATCGAGCTAACTGAT
CGGTCAACTTAGATGATTCTAT
GenBank Accession BX531591 [GenBank]
Graphic View Graphic view of gene At3g18780
Predicted Position of Insertion Chr3:6475820 - go to primer design
BLAST e Value 6e-80
Hit Clone Code (BAC ID) MVE11
Hit Gene Code At3g18780 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation actin 2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX531591 [GenBank]


Last Updated on 10.06.2021 13:37