SimpleSearch - Line and FST details


Line specific information

 
Line ID 486B04
Vector Used pAC161
Line Availability available as T3 set from NASC (N446576)
Segregation Analysis 50:23:19
Confirmed for Hit At1g54220
Parent of DUPLO pair 2277
Parent of pair(s) none

Gene hit At1g54220

 
Sequence (A. th genome BLAST matches underlined) 
>26-K026178-022-486-B04-8409
GNAGCCATTTACAATTGAATATATCCTCGGAGCAGACGCAATTTGCTGCGTTATTGCCTG
CTGCTATGAGTTGTGACGCACTTGTATTATTTGGTAATCCACGTCAGTCGACCGCCTTGA
TTCAGTCACTCATCATCATTGGAGAAATCTAATATTCTTCTTCTTACTGCAGGTGCCATT
GGAGCTGAATGGTTGAAAGCATTTAAGGGATACGTCGAGAACCCTAAATCTATGTTACTC
TAAGAGAGAACCAACCACGCAATGGAAAAAAACACATCAAAAGCTGTCGTAAGAGTCTCT
GTATGGGATCCTCCCTATAGTGAGACNNATTNNTCNNNNN
GenBank Accession CR397613 [GenBank]
Graphic View Graphic view of gene At1g54220
Predicted Position of Insertion Chr1:20246667 - go to primer design
BLAST e Value 3e-77
Hit Clone Code (BAC ID) F20D21
Hit Gene Code At1g54220 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Dihydrolipoamide acetyltransferase, long form protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CR397614 [GenBank]


Last Updated on 10.06.2021 13:37