SimpleSearch - Line and FST details


Line specific information

 
Line ID 486D06
Vector Used pAC161
Line Availability available as T3 set from NASC (N446602)
Segregation Analysis 50:25:13
Confirmed for Hit At1g30730
Parent of DUPLO pair none
Parent of pair(s) 82445, 82482, 82501, 82520, 82537, 82557, 82572, 82590, 82605, 82617, 82629, 82640, 82649, 82659, 82665, 82673, 82680, 82688, 82695, 82699, 82703, 82706, 82708, 82711, 82712

Gene hit At1g30730

 
Sequence (A. th genome BLAST matches underlined) 
>44-K026179-022-486-D06-8409
TATTTCCCGGAATACTTTGTTCGTTCCTCCGAAAGTTTATCTCATCGAACTTGGTTTTGA
TATCCACTAACCTCTCGAAATTGTCTTTGAAATATTTAGCCCCATAGATTTTACCTTCCT
CGTATGGGATCCTCCCTATAGTGAGACNTATTTGTCNNTCNTTTTTTTTGTATTTTTTTT
TTTGTGGGTTGTGTGGTTGTCTGTNTTGTGTATTATATCCGCACTAAACGGAGGATCCCT
TACGACACATGTATTTTGTAGATTTCGAGTACGCTTAAGATTTTTGTTTATATAAATCTA
GATATCATTATGATTGCGAGATTCAGCTGATTGATTCTTGCTTAAATCANTTTCTTGATT
TCCAACTATTTTTGGGGGCAGACTGTCACAATTCCCATAAAATTGCAATTAGGCAAATAT
GTCCTTATATTATGACAGAGTTTAGTTTGATCACGCCAAATATTAGCATTG
GenBank Accession CR397646 [GenBank]
Graphic View Graphic view of gene At1g30730
Predicted Position of Insertion Chr1:10902423 - go to primer design
BLAST e Value 4e-58
Hit Clone Code (BAC ID) T5I8
Hit Gene Code At1g30730 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation FAD-binding Berberine family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR811002 [GenBank]


Last Updated on 10.06.2021 13:37