SimpleSearch - Line and FST details


Line specific information

 
Line ID 487F04
Vector Used pAC161
Line Availability available as T3 set from NASC (N446720)
Segregation Analysis 50:35:22
Confirmed for Hit At3g59910
Parent of DUPLO pair 949
Parent of pair(s) none

Gene hit At3g59910

 
Sequence (A. th genome BLAST matches underlined) 
>30-K117987-0022-487-F04-8409
CAGGGACTGCTCGGTATGCTTGTTGAAGGTGGCGCATATGTTGTGTGCCTTTGCTTCCTT
GAAGCATCGATCTTTGGTAGTACAGATCATTGTCCGGGTCTTACTGTATGTAAGAGCCCT
GTCGACATCTAGCTTCTTGAATTGAAAACAAATAGGGAATTACTCTTTCTTTTTCTCCGC
ATTGACCGTCAGACGCATTGCTGATCCAAGTAGATTTCCCGGGGATCTGGGATGTCATCT
CCTGTTATACAGGGACTGCTCGGCATTCTTGTTGAACGTGGCGCAAATAATGAGAACCAC
TGTTTCCTTGAAGATTCCCGGTTTGGGAGAACAGAAGATGTCGCCGGCTTATTAGCGGTG
AGCTTCCGTTCTTTTTGTTGTTCCGACATGCACAGCGGCTATTAACTCTTTTTGTATTAC
ACGAGCGTGTCATGCTCCACCATGTTAACAAAAATTTTCTTCTTGTCATTGAGTCCTAAG
AGACTCTGTATGAACTGTTCGCCAGTCTTTACGGCGAGTTCTGTTACGTCCTCTATTTGA
ATCTTTGACTCCATGGGAATTGGGGATCCCCTAGCCTGCCCGGCCA
GenBank Accession HG967806 [GenBank]
Graphic View Graphic view of gene At3g59910
Predicted Position of Insertion Chr3:22132007 - go to primer design
BLAST e Value 2e-25
Hit Clone Code (BAC ID) F24G16
Hit Gene Code At3g59910 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Ankyrin repeat family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX532124 [GenBank] BX532123 [GenBank] HG967806 [GenBank]


Last Updated on 10.06.2021 13:37