SimpleSearch - Line and FST details


Line specific information

 
Line ID 488H12
Vector Used pAC161
Line Availability available as T3 set from NASC (N446848)
Segregation Analysis 50:16:10
Confirmed for Hit At1g71140
Parent of DUPLO pair none
Parent of pair(s) 5899, 5922, 5983, 8794, 11390, 91593, 91608, 91621, 91638, 91647, 91656, 91657, 91658, 91659, 91660, 91661

Gene hit At1g71140

 
Sequence (A. th genome BLAST matches underlined) 
>96-K019566-022-488-H12-8409
GTATACCTATTCAGTTCTGAAACTGAAGTTGTAGACTATGTAAAATCAATGGCTCCACTG
CTTTCTTTATCGGTCATATTCGATGCCCTTCACGCAGCTCTCTCGGGTTAGATGATCTCC
TTCTATAATGTTTTAAGAGATCTAATTCAATGAAGTTAAGAGTTATAAAATGTGTTTACT
GAAACAGGTGTGACTATAGGATCCTCCATATAATGTGTTGGGGCATACGTAAACCTATGG
GATCCTCCCTATAGTGAGACCTACAGCACGTCGATATACGATAAAAAAGAGATGGAAACA
CCCCTTACTGATAGAACATTGGCTCCTATGGGATCGTCGNTATATTGAGACACATTAACA
CTTTTGAT
GenBank Accession BX532205 [GenBank]
Graphic View Graphic view of gene At1g71140
Predicted Position of Insertion Chr1:26826165 - go to primer design
BLAST e Value 2e-104
Hit Clone Code (BAC ID) F23N20
Hit Gene Code At1g71140 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation MATE efflux family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX532206 [GenBank]


Last Updated on 10.06.2021 13:37