SimpleSearch - Line and FST details


Line specific information

 
Line ID 489D08
Vector Used pAC161
Line Availability available as T3 set from NASC (N446892)
Segregation Analysis 50:20:14
Confirmed for Hit At5g47490
Parent of DUPLO pair none
Parent of pair(s) 9480

Gene hit At5g47490

 
Sequence (A. th genome BLAST matches underlined) 
>60-K019637-022-489-D08-8409
CCCATTAGATGGAATCTATCCGATTTGTTTTCATAACCCAATGAGTTGTTTTGGAATGCG
CCTATTGGAGCAGGACGATGCTGAGCAACTTCCTCATCTGGGGGTTCCACACCTCTTTCC
ACCCATCTCTTTAGTTTGTCGTCATAGCAGAACTGATTTTCTGCGCCCAATTTTGCCTTG
ACCCACAGCATGAACCGAATAAATTAGAATAAGTTCAAGAGATATCATCACGACCGAAGC
ATTTATCAGTGTACCTCTTTGGATGACCGAGCTAAGACCCTTCCTACAGTGTCCTTGAAA
ATGCCAAAACCAAAGCGACTAAGCCGCGAACCTGCCAGTGACCCAGATGATTTCAACTTT
GTCACCCCATCAACTGCCTTTTCTTTCAAGGAGTCAGCCATTTCCTAAAAAAAGGGAAAC
CTTTTATAAATTCCATTTTCAAATATTCTTAGCGGAGATTATGGTCTTCCTGGTATAGAC
CTGTATCGGCGTCCTACCGAAATCTGGCTCTGATACACTCCTATGGGAT
GenBank Accession BX532248 [GenBank]
Graphic View Graphic view of gene At5g47490
Predicted Position of Insertion Chr5:19269615 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) MNJ7
Hit Gene Code At5g47490 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RGPR-like protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX532248 [GenBank]


Last Updated on 10.06.2021 13:37