SimpleSearch - Line and FST details


Line specific information

 
Line ID 493G08
Vector Used pAC161
Line Availability available as T3 set from NASC (N447312)
Segregation Analysis 50:32:19
Confirmed for Hit At1g01570
Parent of DUPLO pair none
Parent of pair(s) 1514, 87428, 87430, 87432

Gene hit At1g01570

 
Sequence (A. th genome BLAST matches underlined) 
>63-K019652-022-493-G08-8409
TGATCTGANATTTCCCGGACATGAAGCCTTTACATTGAATGATCCGTGTCACTATGGTGA
TCCTCCCTATATCGAGATTTGAACGGGTCATTGTTTATAAGAAACCCGACCCGGATAGAT
GGAATAAACATAGGGTAAGTAAACAATGTTATCATTTTTAAGTTTTGTTTCTCTATAAGT
TTTATTGATTCATAATTTTGTGGTGATAATTTCAGGCTCCGAGAAGAGATTGTTGTAGAG
TATTGCCCACGACGAAGAATGGGACTATGGTAATCGATGTAGGAGCTTGTAAAGATGATG
AATTTGCTGAATTCCTTGTCAAATAGAATTATTTATCTTTTATAGCGTTTTCTTGTTACC
AATCGTATTTTTGAAATTTCGAGCTTATGTTTTAACAGCAATTTCGAGCTTGTAAATTAT
TTCTTAAAACTTTTTTTAATCTTTATTGACCTCTATGGGATCCTGCCCCAATAGTGGAGA
NTCTGAGACTGCATCTTTGATATTTTTGGAGTAGACAAGCGTGTCGTGCTCCACCATGTT
GACGAAGATTTTCTTCTTGTCATTGAGTCGTAAGAGACTCTGCATGAACTGTTCGCCAGT
CTTTACGGCGAGTTCTGTTAGGCCCTCTATTTGAATCTTTGACTCCATGGGAATTGCGGA
TCCTCTATGGGATCTCCCCTA
GenBank Accession BX532697 [GenBank]
Graphic View Graphic view of gene At1g01570
Predicted Position of Insertion Chr1:207168 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F22L4
Hit Gene Code At1g01570 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation transferring glycosyl group transferase (DUF604)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX532697 [GenBank]


Last Updated on 10.06.2021 13:37