SimpleSearch - Line and FST details


Line specific information

 
Line ID 495A10
Vector Used pAC161
Line Availability available as T3 set from NASC (N447434)
Segregation Analysis 50:40:36
Confirmed for Hit At3g27170
Parent of DUPLO pair none
Parent of pair(s) 3609, 3723, 7088

Gene hit At3g27170

 
Sequence (A. th genome BLAST matches underlined) 
>73-K019654-022-495-A10-8409
GGACTGAAGCCATATATCCTTGAATATATCAATTGAATGTGGATGTTGTAACCCTGCAAG
GTGTATGTAAAAGTGTTCAAATATATTTGATGTGCTAAAGAACACTACCCATAATGCACT
TCCCTGTTTTAAATGAAACAAAAGTACCTCCCTTCGGGTACTATGGGATCCTCCCTATAA
TGAGGACTTCTGTTCAACCACCCAAACGTCGGAAAGCCTGACGACGGAGCAGCATTCCAA
AAAGATCCCTTGGCTCGTCTGGGTCGGCTATGGGATCCTCCCCTATAGTGAGGANNGCAN
CTGCACCAAGGACAGCATAAAGCCCTTGGTCAATACTTGTGTATGATCCCATTGCAGCGC
CAATCATTCGGCCATATGCAGCACCCATGAGGATGATGGGGAGGAAGAGACCAGACCGTG
TTGCAATACCAAATGTGAAAAGCCCCAAGATGCAGGATAGCACAAAGAATATCCAAAGGG
AACCCATACCAAACTCATTGAGAGTGTTGGAAGAGAAAAGGTTTCTGACCGCATCATCGC
CTGGGCGTGAGAAGCAGACTAGCTA
GenBank Accession BX532813 [GenBank]
Graphic View Graphic view of gene At3g27170
Predicted Position of Insertion Chr3:10026280 - go to primer design
BLAST e Value 3e-122
Hit Clone Code (BAC ID) MYF5
Hit Gene Code At3g27170 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation chloride channel B
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX532812 [GenBank]


Last Updated on 10.06.2021 13:37