SimpleSearch - Line and FST details


Line specific information

 
Line ID 495D03
Vector Used pAC161
Line Availability available as T3 set from NASC (N447463)
Segregation Analysis 50:6:5
Confirmed for Hit At4g34790
Parent of DUPLO pair none
Parent of pair(s) 80324, 80351, 80397, 80444, 80469, 80470, 80473, 80476, 80477, 80478, 80479, 80480, 80487, 80488, 80491, 80492, 96611, 96615, 96619, 96621, 96622

Gene hit At4g34790

 
Sequence (A. th genome BLAST matches underlined) 
>20-K019654-022-495-D03-8409
TATCATGTAGATTTCCNGGACATGAGCCATTTACATCTGATATATCCATCATAGTAAATT
GGTAATTTGGTTATTGCTTCCTATTTTCTTGCATGATGATGGATCTTAACTTCCTGGATT
CGCCGACAGCGTTGGATTCACATGTTGAGCTGTGGTGCATAGCTTATTCAAATAAATCGA
GATTTGACTATGTGCATCACAATAAGATGATAATTCTTACCTTGTGCTCCATCTTCCTGC
GTTGGATCTACATATATATAACGCTTCCTGCTTCAAAGTGCTCATTGCATCACTCTATGG
GAGCCTCCCTAATACCAGGTCGAGAAGAGTCGTTTCTTTATCTCATTACTTCTCATCAGC
TGCATTGAGGAACGCATTAAGTGATGTAATAGTCTTGAGGGATTTAATTAAGCTGTTTTT
CTTTCCTCTTTTAAGAGGAGAATTATAGGGAAGTTACTTATGTGTGTATATGGTGACACT
TGTTCAGAGCTTAAGTTGTATTTTGAAATAAGTTTTTTTTTTTTTTTT
GenBank Accession BX532846 [GenBank]
Graphic View Graphic view of gene At4g34790
Predicted Position of Insertion Chr4:16594556 - go to primer design
BLAST e Value 1e-105
Hit Clone Code (BAC ID) F11I11
Hit Gene Code At4g34790 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation SAUR-like auxin-responsive protein family
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At5g52640

 
Sequence (A. th genome BLAST matches underlined) 
>20-K019627-022-495-D03-8409
ATGAGCATTTACAACTTGATATATCCATCTATAAATTGGTAATTTGTTTATTGCTTCCTA
TTTTCTTGCATGTTGTTTGTTCTTTAATTCCTGGATTTGTTGATAGCGTTGGATTCGTAG
GTTTAGCGTTGTGATTGCTTATTCAAATAAATCGTGATTTGGCTTGTGCATCACGTTAAG
TTTAGAATTCTTAGCTTGTGCTCGATCTTCATGTGTTGTAGTTACATATATAGAACGGTT
CTTGCTTCGATGTAGTCTTTGATTTACCCTATGGGATCCTCCCTAATAGTGAG
GenBank Accession BX532845 [GenBank]
Graphic View Graphic view of gene At5g52640
Predicted Position of Insertion Chr5:21352708 - go to primer design
BLAST e Value 4e-118
Hit Clone Code (BAC ID) F6N7
Hit Gene Code At5g52640 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation heat shock-like protein
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37