SimpleSearch - Line and FST details


Line specific information

 
Line ID 495F02
Vector Used pAC161
Line Availability available as T3 set from NASC (N447486)
Segregation Analysis 50:3:3
Confirmed for Hit At3g54340
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At3g54340

 
Sequence (A. th genome BLAST matches underlined) 
>14-K019627-022-495-F02-8409
GATCATGAGATNNGCGTTCGCAAGNCGTCATGATCGTCATTNCTGACAGCAGCAGCGGAT
AGCCGCTATCGACATCGGAGAGCACGCCGAACGCGGTTACCTATGGGATCTNCCCTATAG
TGAGANCCANCNAGCANGGACTGCNTCCCTGTATCTGACATCGACAAGGTTTATGATATC
CTCCGTATAGCGAGATTGCCGCTGTGCTCTCTCTATATCACGCCAAATGCGGTTTGCTAT
GGGATCCACCCTATACATAGATTCCCCGCCAGTAAACAAGATGTTTCTTTTTCTCACACA
TATATAGAGCAATAAAATTCGTTTTTTAATAATTCATTTCAAAACTGACGCTTGGGTATA
TAAGATTCCTTGACTTTCTATGGGATCCTCCCTATAGTGAG
GenBank Accession FR811120 [GenBank]
Graphic View Graphic view of gene At3g54340
Predicted Position of Insertion Chr3:20120267 - go to primer design
BLAST e Value 8e-27
Hit Clone Code (BAC ID) T12E18
Hit Gene Code At3g54340 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation K-box region and MADS-box transcription factor family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR811120 [GenBank]


Last Updated on 10.06.2021 13:37