SimpleSearch - Line and FST details


Line specific information

 
Line ID 497A11
Vector Used pAC161
Line Availability available as T3 set from NASC (N447627)
Segregation Analysis 50:23:19
Confirmed for Hit At3g63150
Parent of DUPLO pair none
Parent of pair(s) 69514, 97575

Gene hit At3g63150

 
Sequence (A. th genome BLAST matches underlined) 
>81-K019698-022-497-A11-8409
ATATTTAGATTAACTTTGTCCTATATTACATATTTAGTCCCTACAAAACCTACCTATGGG
ATCCTCCCCTATAGTGAGCATGATGGAGATCCGCACGATACAAACCTGCATTGAGTGTTC
TGCACCGACCCGGATACAAGTATCTTCTTGCTTTGGTTCTCTGACCGAAATATCTTCTGC
TACAGTTTAACGATTGTCTTTTGGCTAACAGAGAAAATGTTCCGTATAGATACTAGGAGC
CTTTAGAACAGATAATGCTGAAAGACCACGCCAAACTGAACCATGCCTATGGGATCCTCC
CCTAAAGTGAGACCCCC
GenBank Accession BX533015 [GenBank]
Graphic View Graphic view of gene At3g63150
Predicted Position of Insertion Chr3:23332319 - go to primer design
BLAST e Value 6e-74
Hit Clone Code (BAC ID) T20O10
Hit Gene Code At3g63150 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation MIRO-related GTP-ase 2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit T4D8

 
Sequence (A. th genome BLAST matches underlined) 
>81-K019683-022-497-A11-8409
GGAGACGATAGGGCCCAAAATCCCTTATCGATGTACTATCTACTCTTCGGATCCTCCTAC
TTATATGTTATCCAGATATTCTATTACCTGAAAGTTACGATTCGATGGGATGCTCCCAAT
ATTGAGATTAACTTTGTCCTATATTACATATTTAGTCCCTACAAAACCTATCTATGGGAT
CCCCCNTTATAGTGAGA
GenBank Accession BX533014 [GenBank]
Graphic View Graphic view of sequence BX533014 of line 497A11
Predicted Position of Insertion Chr2:4049745 - go to primer design
BLAST e Value 5e-19
Hit Clone Code (BAC ID) T4D8
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37