SimpleSearch - Line and FST details


Line specific information

 
Line ID 497F09
Vector Used pAC161
Line Availability available as T3 set from NASC (N447685)
Segregation Analysis 50:16:11
Confirmed for Hit At4g03140
Parent of DUPLO pair none
Parent of pair(s) 9243

Gene hit F26K9

 
Sequence (A. th genome BLAST matches underlined) 
>70-K019698-022-497-F09-8409
TTCCGGACATGAAGCCTTTACATTTATAGTGGAGATCTCTACGACCCCATTTTGTAACAG
TGTTTTTTACCGAGTGATTACGATTGTCTAAGTNTTTAGAAAAAAATGGAATGGCCTATG
GGATACTCCCTATAGTGAGATCTCGGAGCATATATCTATGGGATCCTCCCTATAGTGAGA
TCTTTGAATATAGATGCTCAATCTTGTATGTTTTGCGTTGCGGCCTCTAATGCTTTTGAA
CAGATAAGCAATTGTCTTTGCTTATTACTGCACTTTAACTTTATGGCTACACCATGATGC
TTCGGATCTACCGTCCTTAGCTACATATGAATTATACTATCACTATTTCTCTATGGGATC
CTCCCTATGGGGAGACGGGACGTTTCCCTCTCCTGAAAAGCCT
GenBank Accession BX533082 [GenBank]
Graphic View Graphic view of sequence BX533082 of line 497F09
Predicted Position of Insertion Chr3:23231793 - go to primer design
BLAST e Value 3e-26
Hit Clone Code (BAC ID) F26K9
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At4g03140

 
Sequence (A. th genome BLAST matches underlined) 
>70-K019683-022-497-F09-8409
ATTATAATGGATGAGACTATGGGATACTGCCTCTATATATAGATCTCGGAGCAATATAGC
TATGGGTCCTCCNCTATAGTGAGACGCNNNGAACCGNCTTCTCTGTCCACTATGCTCCTC
TTGAGTGGCGGTCCATCTTTGGGACCACTGACAGCACTTGCTTCTTCCACGATGGCCTTT
CCTTTATCGCAATGACGGTTGTTGGAGGAGCCACCTTCCTTTTCCACTATCTTCACAATA
GAGTGCCAGATAGCTGTGCTATGGAATCCGAGGAGGTTTCCGGCTATTACCCTTTGTTGA
ACAGTCTCCATTGCCCTTTGGTCTTCTGAGACTGTATCTTTGATATTTTTGGAGCAGACA
AGCGTGGCGTGCTCCTCCATGATGACGAAGATTTTCTTCTTGGCATTGAGTCGGAGGAGA
CTCTGCCTGATCTGATCGCCACTCTTTACGGCGAGTTCTGTTAGGTCCTCTATTTGAATC
TTTGACTCCATGGGATTTGGGGATCCTCTA
GenBank Accession BX533081 [GenBank]
Graphic View Graphic view of gene At4g03140
Predicted Position of Insertion Chr4:1392191 - go to primer design
BLAST e Value 6e-06
Hit Clone Code (BAC ID) F4C21
Hit Gene Code At4g03140 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation NAD(P)-binding Rossmann-fold superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37