SimpleSearch - Line and FST details
Line specific information
| Line ID | 498B05 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N447729) |
| Segregation Analysis | N/A (line seemingly not resistant, T2 plants grown without drug) |
| Confirmed for Hit | At4g35260 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 3886, 3893, 8331, 9928 |
Gene hit At4g35260
| Sequence (A. th genome BLAST matches underlined) | >34-K019699-022-498-B05-8409 TGATCTGANATTTCCNGGACATGAAGCCATTTACATTGAATATATCCTGATGAAGAAGAC TTAGTGGTCATACCAGAGATACTGGAACGTGAGAAGAGTGATCTTGAACAGCGACGGTGT TCCTGGTGTAATAGATAGATTGAACGTGAAAGGTCCAAGATCAGCTCCATGGTGTGGAGT CGATGTGTATTTGTGGAATCATCTTCATTGGACAGGGGCCATTATATGGAATGAGTGATT GCACTGATCCGATGGATATGCGTGGGTGATCACAAAATTCTGTACGGACCGCATTGCAAT ATATGATGCTCACTATGCCGACCTGAACCACTGGCAGGACGTTACTGTGGCGAATAAGGC TATCATCATGTGACTTGCTCGATGGTTTGATCATGGAATCTTGCCGCGAGGTTGAGAGAA AGTGTCCCAGCATCACCTAGAATGAAATCATTGCTGATAACTGCTGTATGCAACTTGCAT GCATACCAGAGCATATTCGATGTCATGGTATGTGTCTNGAGTATCTACATATGAATTGTC TTGACGTTCTTGACGTCTTCTATGTCTTACTTTGAAAAAAATATCCATACCTCTCTCACT ATGGGATCGTCCCTATAAGGCAGAGAACCGCCATCAATACTGATTGTTCACCTA |
| GenBank Accession | FR811164 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:16775810 - go to primer design |
| BLAST e Value | 2e-46 |
| Hit Clone Code (BAC ID) | F23E12 |
| Hit Gene Code | At4g35260 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | isocitrate dehydrogenase 1 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
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Last Updated on 10.06.2021 13:37 |
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