SimpleSearch - Line and FST details
Line specific information
| Line ID | 500C07 |
| Vector Used | pGABI1 |
| Line Availability | available as T3 set from NASC (N447935) |
| Segregation Analysis | 50:44:33 |
| Confirmed for Hit | At4g24020 |
| Parent of DUPLO pair | 12084 |
| Parent of pair(s) | none |
Gene hit At4g24020
| Sequence (A. th genome BLAST matches underlined) | >51-K019569-022-500-C07-CR3S ACTTCTATCATAAANTTTCTATTCCTTAACCACAATCCAGTGAAGTGACCGCCTCACCCT TTTTTTTTTTTTTTTGGAAATTTTTTTAAAAAATTTTTTTTTTGGTTTTAAATTTTTTGA AGGGGAATTCCCCATAAAGGGAAAAGATCNATATTTCTGGTAAAATGATAAAGTTGCCAA AAATAGTTAAGTTCTATAAAAGGAGTGGGAAGCAAGTCAAGTTTAGTATGGGATCCTCCC TATAGTGAGACCTATCGTATCCGTTAGATTAAGCATTCATACTTTTGTGCAGTNTTGTTT CGTGCTTATCTTATTATAACAATAAATAATTTAATAAAAAAAAATATTTTTTTTTTTTTA GACCCACAAAATTTAGCTATATACAGAATACCTTTTGTGCTTGCACAAGGTTCATTATAT AAAAAAAAAGAATTATTTGTGGGGTGGGGGTAGTGTATCCAGATAAATATAATTCTTTAT ATTTTATTTTATCTCGCGCATAAGTACGTTAAATATAATATTAATATACCGGTACTATAA GGGCTACGTTTTAATTACTATATTGATATATAACCTACATTATATAAATCGATCTCTATA ATTATACTTCGTAAAAGGATTCGATGTGTAAAACAATAGGGATATGTTACGGGTATAGTG CACGCTAGGATAATAAATAAAAATAGTATCCGCCTTATTACACATTCGTTGTTGATAATT AAATACGCGTTAATAATTTGTACATGCAGGGCAGATTATTTAGAACAGTGATACCATAAT ATATGGAAAAATATGGTGTGAATCTGTATTATATAGCGGCATTATAATATTTCCTTACCG GATTAAGAATAGTATATATAATATAG |
| GenBank Accession | FR811208 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:12480492 - go to primer design |
| BLAST e Value | 4e-32 |
| Hit Clone Code (BAC ID) | T19F6 |
| Hit Gene Code | At4g24020 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | NIN like protein 7 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | BX537001 [GenBank] BX537001 [GenBank] BX537003 [GenBank] FR811207 [GenBank] FR811207 [GenBank] |
Gene hit At4g34740
| Sequence (A. th genome BLAST matches underlined) | >51-K019129-022-500-C07-8409 TAAGAAAATTAAAATAAACCTAAAAGAGCAAATTTTTATTCGCATTGCTCTCAAAAATCA TCCATGGCGGCCACCCCTATGGGATCCTCCCTATAGTGAGACTCTGGGATCCCCCCCATA GNGGGCCACCCTGTTTTTCCCCCCCCCCTTTGGACCTGAATGGAGACCCCCCGTGGGGAC CCCCCTCTAGAGGGGCTCAGTGAATCTCCCTACCCCGTGGGA |
| GenBank Accession | BX533344 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:16576650 - go to primer design |
| BLAST e Value | 6e-34 |
| Hit Clone Code (BAC ID) | T4L20 |
| Hit Gene Code | At4g34740 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | GLN phosphoribosyl pyrophosphate amidotransferase 2 |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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