SimpleSearch - Line and FST details
Line specific information
| Line ID | 500E07 |
| Vector Used | pGABI1 |
| Line Availability | available as T3 set from NASC (N447959) |
| Segregation Analysis | 50:36:26 |
| Confirmed for Hit | At1g17190 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 5653, 7593, 7643, 10387, 10400, 90976, 91056, 91074, 91107 |
Gene hit At1g17190
| Sequence (A. th genome BLAST matches underlined) | >53-K019129-022-500-E07-8409 TTTAGATGAAGTTAATTTATTGGGAGTTATTGGTATAACATGAAGAAAAAACTATACAAC TTTTAAAATGTTCAACAATCAAAATTAGGCTCACGTATTTTTCAATGATTTATGACATAA TCAAAATTAGGCTCACGTACTTTCAATGATTTATGACTTTGATGATTTTTGGTTGGTTCA GTTTTACGACCCATCATGGAAGGTATGGGCAACAATGGGCGAAGAACATGCAGCAGTGAA GAAGGAATTGTTGGAACATTTCAAGACACTTGAGACAGAGCTCGGAGACAAACCTTATTA CGGTGGTGAAGTANTTGGATACCTATGGGATCCTCCCCCTATAGTGAGACTATNGGATCC TCCCTCTCCCGAAAAAAAAAAAAAATACACCGGGGGGGGGGGGCGTGAATTATNAACCCC ATTTTAACATTAATGTAAACACAACAAAATAACGTTCCCCNAATTGGAAAAATATGAAAA TTGGCTTTCGCGTTTAAATAACACAGATCCGAATTTGTTTGTTTATGCCGAAGGGACTTC GTATTATAAGAACGCTGCGGACA |
| GenBank Accession | BX533383 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:5875849 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F20D23 |
| Hit Gene Code | At1g17190 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | glutathione S-transferase tau 26 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | BX533384 [GenBank] |
Gene hit T10I14
| Sequence (A. th genome BLAST matches underlined) | >53-K019570-022-500-E07-CR3S TACTTCTATCATGATGTGTCTAATTCTAAANCCAAATCCAGGTGACTGGATATCACTCGC TATATATGGGAATCCTCCCTATAGTGAGATTANACCTTTTTTTCCCCACAATACATTTTT ATTATTCACCTTCATATTTCTTACATAATACTACTTCACAACTAGTCAACTCACCCTCAA TTATAAATGTGAGGTACGGCTTGGAGTGTGTCTAAACTTCTAGTGGTATGGGATCCTCCC TATAGATAGCCTGAATAACCCAAGTGTGAAAAATCACACCTCA |
| GenBank Accession | FR811227 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:11745995 - go to primer design |
| BLAST e Value | 4e-13 |
| Hit Clone Code (BAC ID) | T10I14 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
Gene hit At3g01310
| Sequence (A. th genome BLAST matches underlined) | >53-K019569-022-500-E07-CR3S CTAATTCCTAAAACAAAATCCAGGAGACTGGAATCACTCGCTATATATAGAATCCTCCCT ATAGTGAGATTTAAACATTTTTTTCCCGAAAAGAGTGGTTTTCTGTTGCAATCCTCCCTT CTGAAAAATTGCACTAACTCAACTATCATGTCACCTAAAATGATAACCTGCGAAAACTTC CGGCGAGTGTGAGTAATATATTGATGATCTGGTATACTCCCTAGAAATGGACTGAATAAC ACAACCTTGATGAATCACACCTCAATAAACTAACTCGTTTAATTTTCTACAAAAAGACTA ACGTAAGATAGGCTGTTTATTGACCCTATATTTTATATATACAACGCCAAACTCACTTTC TTAAAGCAGCATATGCCTGAGCCTTCTCAAGAGGATATCAAGAGGAATGAAAAGCAATCG GGCAATCACAAATGGGCCCACTGAAACAGTCAAAAGTCTGGTAAAGTTTTGATTCCACGA TATACTT |
| GenBank Accession | FR811226 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr3:100433 - go to primer design |
| BLAST e Value | 1e-65 |
| Hit Clone Code (BAC ID) | T22N4 |
| Hit Gene Code | At3g01310 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Phosphoglycerate mutase-like family protein |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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