SimpleSearch - Line and FST details


Line specific information

 
Line ID 500F09
Vector Used pGABI1
Line Availability available as T3 set from NASC (N447973)
Segregation Analysis 50:40:31
Confirmed for Hit At4g39260
Parent of DUPLO pair none
Parent of pair(s) 1755

Gene hit At4g39260

 
Sequence (A. th genome BLAST matches underlined) 
>70-K019567-022-500-F09-CR3S
TGACTCGTACTTGTAAGTACTTCTATCAATATATTTCGTACTCCTAAACCAAAATCCAGG
GGTATGGGATCCTCCCTATAGTGAGTCGTATATACTCAAAACGAAACTGTTTCATCAAAA
AAGTAAACCAAACGAACGATAACCAAACCAGAAGTGGTGACACCAAACCAAATCTAAACC
AAAAACAGAGCAGCAGCACGCAAACAACTCTATCGTTGATTACCAGCCGCCACCACCGAC
TCCTATAACTTCCACCATCACCGCCTCCGTAGCCACCTCCCTCACGGCGTCCACCACCAC
CGTATCCTCGGCCACCACCGCCTCCACCAGATCCGTAACCTCCGCTACGTCTCTCGTAAC
CACCACCGCCTCCTCCTGAGTATCCGCCGCCACCGCCTCCTGAGTATCCACCACCGCCTC
CGCTGCGGTAACCACCACCGCTTCCACCACGGCCTCCTCCGCCACCGCCGCTACCTCTCG
ACTGAGCCTCGTTCACGGTGATGACACGTCCATCGAGCTCTTTACCGTTCATCTCTTCAA
TCGCATCCCTCATGGCTTTCTCGTCCTTGAAGGTGACGAATCCGAATCCCCTTGATCTTC
CACTCTCGCGGTCGTTAATGATCTGTAAACAAACCAAATCATACACATCAGCAAAAACAA
TCGTGGAAGGAATATAAAACAAAGCGATGAATATAAAGCAAAAATCGATCGATCTCCGAG
CTCATAGAAGCAGGAAGATGAACGTATGGGATCCTCCCTATA
GenBank Accession BX537064 [GenBank]
Graphic View Graphic view of gene At4g39260
Predicted Position of Insertion Chr4:18274045 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T22F8
Hit Gene Code At4g39260 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation cold, circadian rhythm, and RNA binding 1
Insertion Classification TS2TE (3')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX533418 [GenBank] BX533419 [GenBank] BX537063 [GenBank] BX537063 [GenBank] BX537066 [GenBank] BX537064 [GenBank]


Last Updated on 10.06.2021 13:37