SimpleSearch - Line and FST details


Line specific information

 
Line ID 501B04
Vector Used pAC161
Line Availability available as T3 set from NASC (N448016)
Segregation Analysis 50:21:17
Confirmed for Hit At1g55440
Parent of DUPLO pair none
Parent of pair(s) 420, 10880, 11206, 93694, 93699

Gene hit At1g55440

 
Sequence (A. th genome BLAST matches underlined) 
>26-K019701-022-501-B04-8409
GGACATGAGCCTTTACATGAAGCCATTTACTCTTTCAAGCCATTGTTGTATCTTTTTCGT
CACCGTAGCAAAGTGTGAGTAGATGCCTATCGTGCTTGTAGTAGGCCTCACAAGGAAAAC
TATGGGATCCTCCCTATAGGGAGCACTCCTTAGAATTCCCTATTCGATAGGCGTGTATCA
GCCTGCTGATTGCGTATAGGCTACCTGATTTCGCAGACTGTTGGATCTACTCTATCCAAT
GATCGCTAATGGCTCTGAAGGTCTGACTTTAAGTTGTTAGAATCCTGACCAATGGCATCC
TCCCTATAGTGAGACCGGAGTTTTATCGAACACGTCACGGAACGTAAGTCTTTTACTCGA
CCTATGTAGTGTTCACTATCAGCGGTTAACCAATGTATCACCTGTACGAACATATAAAGC
ACAGAATGTATTACCCTGTGGTATGTTCCATAGTCCTGGTGCGCTATTCACGCCATACCG
TGATAAAGACAAGCCACTTCTCTCTATATGCTCTCT
GenBank Accession BX533474 [GenBank]
Graphic View Graphic view of gene At1g55440
Predicted Position of Insertion Chr1:20701822 - go to primer design
BLAST e Value 1e-37
Hit Clone Code (BAC ID) T5A14
Hit Gene Code At1g55440 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Cysteine/Histidine-rich C1 domain family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX533473 [GenBank] BX533473 [GenBank]


Last Updated on 10.06.2021 13:37