SimpleSearch - Line and FST details


Line specific information

 
Line ID 502A08
Vector Used pAC161
Line Availability available as T3 set from NASC (N448104)
Segregation Analysis 50:25:16
Confirmed for Hit At2g23270
Parent of DUPLO pair none
Parent of pair(s) 1737

Gene hit At2g23270

 
Sequence (A. th genome BLAST matches underlined) 
>57-K019715-022-502-A08-8409
CGCGACCGAACCAGTTAATGTGGCTGCTTTGGTCTATGGGATCCTCCCTATAGTGAGACC
TCCCGAAACTACCCTTATCTGATTTATGCTGAACGCCAACAAGTACGAATGATCGTAATT
TGAAAAAAAATAAAAGTAGTTTTTCCTTTCATAATAACGCTGCGGATTTCTATTTTTTGG
AATAGCGAAAAAACTGTTTATTTTACTTTCGACATCTGGATTTCAACCTTCATGCACCGC
GGGCAAGTTGGGAACTCCCCCCTCNAGGAATCCCCGGGCGGGGGGGATCCATTAGATCNN
NAAAGAGGGGCAACCCNGGGGGGAGCGCGGCAACGGAACGCCGTTGGGGGGGGGAAACAA
CCCAAAGAGAAGGAAAGGAAGAGTCGGGGCGGGGGGGGCGCGGATTGCGAGGGGAGAGGG
CGGCGCAAATAGTAAAAAGGGGTGTGTGTGACGGGGGGGGAGCGAGTGGCGCCGCGGAGG
AAAAGAACCCCGCGCGAATATGAGCGCAAATAGCGGGAAAAAAAACGCGCAAACGGACTA
AAGCGAGGAGCGCGGAGGGGTTAGTGAGCAGAACGGTAGGAGGTGTAGGGGTAGGGGGGT
GGGAGCACAGGGGGTGGGTGGGGCGATCGAGGAGGTGCCACGCCGACGGGAGCGGACGAA
GTGAGCGGGGGGAAGGGAAAGAGGAAGAAGGGAAGGCAAGCCGTGGGGGGGTGAGGAGGC
GTGCAGCAAAGGAGGGAAAGACAAGTGTTGCGGTTTGTATACAGGGCCGGCGACGCGGAG
ACTAATAGGGTGCGAAACCAGAATGTGCGAGATATTAATCAAAACAACCGCAAGGGTAAG
ACGCGGTGGGAGGAAGGGTAAAGTACGGTGAGAGACATAATCACAACAAA
GenBank Accession BX533576 [GenBank]
Graphic View Graphic view of gene At2g23270
Predicted Position of Insertion Chr2:9903571 - go to primer design
BLAST e Value 4e-10
Hit Clone Code (BAC ID) T20D16
Hit Gene Code At2g23270 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation transmembrane protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX533576 [GenBank]


Last Updated on 10.06.2021 13:37