SimpleSearch - Line and FST details


Line specific information

 
Line ID 502D12
Vector Used pAC161
Line Availability available as T3 set from NASC (N448144)
Segregation Analysis 50:9:8
Confirmed for Hit At5g42720
Parent of DUPLO pair none
Parent of pair(s) 4828, 8553

Gene hit At5g42720

 
Sequence (A. th genome BLAST matches underlined) 
>92-K019715-022-502-D12-8409
TGTGAATTGTGAAGCTCGGTTTGCCCAGAGTTTTTGTCGGAGGGAGTAACTGGTGAAGGA
AGAATCATCTGCGGAGGAGAAGGTAATGTTTGTCTCGTCGGGGCCGCGGCTGGTGGAAGA
CGTGGCCTTGTTGGTGACAATGGAGCCATGGAAGTCTGGGAGACGTAACAAAGATAATTG
ATAGTTAAATTAACATCAATAAGAGGCTATATTGTAGTGCATTTCATGGACTTGCCTCAA
GTTAAATTAACATCATATGAATCATATATGTTCAATTTTAAGTATCCATTGACTATGTAC
CCCAACTTCAGTTCGGGGTTTTCAGTTTACAATTTTTACTTTTATGAAATAGAACATCTG
ATCAAAACTATACGTTTAAGTTCATATCCAATATTTCTATTTAATGTTTGAAACGAGAAC
TTACTTGGTTATAATTGGTAGTCTTGGTGAGCCCGATATCATAAGTCATGGTTAGATCAG
GTCTAAACAAACCGAAGGCTCGTTCAGAACCTTTCCCGGGCTTGAGATTCTCGTCGTACA
ATGCGAACAAGTATGTGTCGATCACTCTCCCGGGCATAAGTGGCGTCCCGGACCCAGATT
TTAAATGAGCAATGAGATTTTTATTGTAAGCTCTATGGGATCTCCCCCATTAGGGAGAAA
AGAGGNGGGAGGNNGGNTTGCCNGNTTGTTTTAATTAGGAGAAGGTAAATAGCCCCCGCT
TGTGTTAAGGGAGAGGAGGAGGAGAG
GenBank Accession BX533623 [GenBank]
Graphic View Graphic view of gene At5g42720
Predicted Position of Insertion Chr5:17132686 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) MJB21
Hit Gene Code At5g42720 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Glycosyl hydrolase family 17 protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX533623 [GenBank]


Last Updated on 10.06.2021 13:37