SimpleSearch - Line and FST details


Line specific information

 
Line ID 502G11
Vector Used pAC161
Line Availability available as T3 set from NASC (N448179)
Segregation Analysis 50:42:35
Confirmed for Hit At3g04000
Parent of DUPLO pair none
Parent of pair(s) 3720, 7139, 11188

Gene hit At3g04000

 
Sequence (A. th genome BLAST matches underlined) 
>87-K019703-022-502-G11-8409
TGATCTGAGATTTCCCGGACATGAAGCCATTTACATTGAATATTATCGGATCCTCCCTAT
AGTAGCGTCCCTAGATTGAGCATTTCGACCATATGGGATCCTATCTATATCGAGTTAAAT
TCACGTTATAGAGTTGCAAAATAACTAAATGAAACAATCTTTATAATAAATGAGTTTCTT
AAAATTAACCTGATAATGCGATCAAAAAGTTCTACTGACATGTCTGAGATAGTGGAATGA
TTAGGATCGGCTATAGCCGCTGAGTTAACCAAGATATGAACCGGCGACTCGAAGACTCGC
TCTGCCTCATCGAAAAGCGACTTTACCTGGCTCGGCTCTGAGATATCAGCCTTCACCACA
ATGACACGTGGACTTTTGCCGGCGACTTCCGCGTCCTTTGAACAGTTGGTGGTAATCGCC
GTGGCAACCTTCTCAGCCTCAACGGGACTATGGGATCCTCCCCTATAGTGAGATATGGGA
TGCTCANCATTATCAGACTATCTTAAGTGTAGAACAGAGATTCTGTTTTTCCGTCTCACT
TATGATCTGCGAGACTCATATTTTCNTTCTCTACAGAAATTCGCCAACATCCACCACAAC
TGGACACTTCTGTCTTCCACAGATGGTT
GenBank Accession BX533660 [GenBank]
Graphic View Graphic view of gene At3g04000
Predicted Position of Insertion Chr3:1036037 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T11I18
Hit Gene Code At3g04000 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation NAD(P)-binding Rossmann-fold superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX533660 [GenBank]


Last Updated on 10.06.2021 13:37