SimpleSearch - Line and FST details


Line specific information

 
Line ID 504H09
Vector Used pAC161
Line Availability available as T3 set from NASC (N448381)
Segregation Analysis 50:31:23
Confirmed for Hit At5g11870
Parent of DUPLO pair 552
Parent of pair(s) none

Gene hit At5g11870

 
Sequence (A. th genome BLAST matches underlined) 
>72-K019717-022-504-H09-8409
TGATCTGAAATTTCCCGGACTGAAGCCATTTACAATTGAATATATCCTGATCCTCCTTAC
ATGAAGGTGCAGACATCACGCAGGATACGATGGTCTGATCCCTCGAGACGCTGTTTTCTA
CTGATGAACATAACTTTTTTCTATAGAAGGAAGGATCCCACAACGATATTGGTATGCGTC
TCATCTCCCAATCTGTGGATACATCACCTCCATCAACTTGCTTCTCTCATATGAGTGGAA
CACCTTCTTTGTCCGCAATGCTCCACGTGGATGGGTCACCAATCTCGGGAGCGCTTGATT
GATAAGTCTTCTTCCAGATTGTAACATACATTTAGCAAGACGAAGTTATTGGGAGGAGCT
TTTTTCCATTACAACTACCTGCGGAGGAATCTCTTTATATCTGTTTCCTTGAATCCGAGG
AGGCTACCACAACTACCGATCTCTAATGAAGTCTCATTTGACTAGGACCGCTCTAGACGT
GTACTTTTAGTTTCTAT
GenBank Accession FR811295 [GenBank]
Graphic View Graphic view of gene At5g11870
Predicted Position of Insertion Chr5:3825878 - go to primer design
BLAST e Value 0.001
Hit Clone Code (BAC ID) F14F18
Hit Gene Code At5g11870 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Alkaline phytoceramidase (aPHC)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37