SimpleSearch - Line and FST details


Line specific information

 
Line ID 506E01
Vector Used pAC161
Line Availability available as T3 set from NASC (N448529)
Segregation Analysis 50:48:38
Confirmed for Hit At5g50040
Parent of DUPLO pair none
Parent of pair(s) 62279, 94146, 94147, 94149

Gene hit At5g50040

 
Sequence (A. th genome BLAST matches underlined) 
>05-K019739-022-506-E01-8409
ATTGTCTTCGGTTTACACTATCGTATCCTACGTATAGTGAGATACACTGAATTGGTAGCT
CCCATTTGGACGTGAATGTAGACACGCCAAAATAACCATTTCCGAATTAGAATAATTTGT
TTATTGCTTTCGCCTATAAATACGACGGATCGTAATTTGTCGTTTTATCAAAATGTACTT
TCATTTTATAATAACGCTGCGGACATCTACATTTTTGAATTGAAAAAAAATTGGTAATTA
CTCTTTCTTTTTCTCCATATTGACCATCATACTCATTGGAGTTTCAAGCAGCTACGGCCA
CGCTCAACCTATGGGATCCTCCCTATAGTGAG
GenBank Accession BX534071 [GenBank]
Graphic View Graphic view of gene At5g50040
Predicted Position of Insertion Chr5:20357511 - go to primer design
BLAST e Value 6e-09
Hit Clone Code (BAC ID) MPF21
Hit Gene Code At5g50040 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Plant invertase/pectin methylesterase inhibitor superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37