SimpleSearch - Line and FST details


Line specific information

 
Line ID 508G12
Vector Used pAC161
Line Availability available as T3 set from NASC (N448756)
Segregation Analysis 50:39:33
Confirmed for Hit At1g26945
Parent of DUPLO pair none
Parent of pair(s) 93819, 93821, 93824, 93827, 93828

Gene hit At1g26945

 
Sequence (A. th genome BLAST matches underlined) 
>95-K019540-022-508-G12-8409
ATTGATATATCCTAATCGTTACATAGATCGTGTTTTGTACTTTAAAACTAATTGTAAAAT
GTTTAAACTATTGGACAGGTGTCTGCATCTAAGGTACTACAAGAGACTTGCAACTACATC
AGGAACTTACACAGAGAGGTTGATGACCTCAGTGACCGTTTGTCGGAACTCTTGGCTTCG
ACGGACGACAACAGCGCCGAAGCAGCCATCATTAGGAGCTTGCTTAATTATTAAATCCGC
ATTACTTAATCTGAGAGCTATTAATCATCCGTTTCCGGCCACCAAATTTATCTTATTATG
GGTATCGTCTGTTTACTTCTACATCATATATTATGAGATATAGCTATGGGATCCTCCCNT
ATAGTGAGAGACACTGGACCCCCCCCTATCAAAGGAAGAGGAATGATGACATATCTGGGG
GGGCGGGAAGGATGACACACAATTCCACTATGCTTCGCGAGACCCTTTAGGTAAATAAAG
AAGTGCATTTCATTTGGACAGGACCGGGCACCCGGAGATCAGATTGCCGCTTAACGCGTT
CG
GenBank Accession BX534370 [GenBank]
Graphic View Graphic view of gene At1g26945
Predicted Position of Insertion Chr1:9352265 - go to primer design
BLAST e Value 1e-176
Hit Clone Code (BAC ID) T2P11
Hit Gene Code At1g26945 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX534368 [GenBank] BX534370 [GenBank]


Last Updated on 10.06.2021 13:37