SimpleSearch - Line and FST details


Line specific information

 
Line ID 511G12
Vector Used pAC161
Line Availability available as T3 set from NASC (N449044)
Segregation Analysis 50:37:29
Confirmed for Hit At1g23880
Parent of DUPLO pair 2441
Parent of pair(s) none

Gene hit At1g23880

 
Sequence (A. th genome BLAST matches underlined) 
>95-K019921-022-511-G12-8409
TGATCTGTNATTTCCCGGACATGAAGCCATTTACATTGAATATTAGCTGATCCTCCTAAG
GATTCTGAATACGGATGATGATGAAGTCAAGCTTTTTTCTTTTTCTCTGCTTTCACGTGA
TAGTTCACATGGACTATAAAGTTTTGCTGTATATGGAAATACACAGATTTTAGGTAAAAG
TTATTTGAAAATCAGGAGATTTTCTGACGTTTTTCTTTTGTTTGAGAATTTGGATTCAAT
GAAAGTAGTCAAGAATTCAAATCAATGTTTTAAATGCAGCATTTAACATTAAACACCTTT
TGCATTTTGATTGTGGACTGTGTATGTATAGTTGATGAATTCTTGAACAGCAAATTGTAA
CTCTTTGAGCAATGGCAGATAGCAGACCCAGGCTATGGGATCCTCCCTTATAGTGAGACT
ACGGGACCTGCGGACTGGAGAGGATAGGACATGAGGTCGATCCATCCTTAGGGACTCTCA
GGTGATGATAGAGGAAATATCTATGTTGCACATACTGTGAATAATGCTATCAGGAAGATC
AGTGAAGCAGGTGATTTTTTCTGCGGTTTTATGGTTTTGCCTTTTGGACAAATGTTTGGT
AAGCATCGGATTTAAGAAAGAATAAAAATGCAATGGCAGGAGTCACAACCATTGCTGGGG
GGAAAATGGTTCGGGGGGGAGGTCATGTGGATGGTCCAAGTGAAGAATGCAAGTTTTCAA
ATGGATTTGATGTTGTTTATCTCGGGAGCAGTTGTTCTC
GenBank Accession BX534740 [GenBank]
Graphic View Graphic view of gene At1g23880
Predicted Position of Insertion Chr1:8436898 - go to primer design
BLAST e Value 2e-169
Hit Clone Code (BAC ID) T23E23
Hit Gene Code At1g23880 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation NHL domain-containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37