SimpleSearch - Line and FST details


Line specific information

 
Line ID 512G01
Vector Used pAC161
Line Availability available as T3 set from NASC (N449129)
Segregation Analysis 50:49:47
Confirmed for Hit At3g03740
Parent of DUPLO pair none
Parent of pair(s) 9090, 11162, 83956

Gene hit At3g03740

 
Sequence (A. th genome BLAST matches underlined) 
>07-K019922-022-512-G01-8409
TGATCTGTAGATTCCNGGACTGAAGCCATTTACAATTGAATCATATGGGAGACATATCCA
CGAGTGTTGATGAGATAGGAATGGGAGGTCCTCATATGACCCACACCGATCCTTGACTAT
GGGATCCTCCCTATGGAAGGCGGTATAAACAATATTGACAACCATAACAGTGATGACCCG
ATGGCCGAACTATGGGATCCTCCCTATAGTGCATGTTTGGAACCCCCCCTTTACCGAACT
GATGGGCATTGGAGGCACTACACTCTTTCCTACCTTTGTCTTCACAGGATTCTTCACCGA
CCGTCCTTTCTGTTACCGCAATGTTGGCATTCGTAGGATACACCTTCCTTTTCCACTATC
ATAACCATAACGTGACATATCACTGGGCAATGGAATCCGAGGATGTTTCCGGATATTACC
CTTTGCTGAAAAGTCTCAATTGCCCTTTGGTCTTCTGAGACTGTATCTTTGATATTTTTG
GAGTAGACAAGCGTGTCGTGCTCCACCATGTTGACGAAGATTTTCTTCTTGTCATTGAGT
CGTAAGAGACTCTGTATGAACTGTTCGCCAGTCTTTACGGCGAGTTCTGTTAGGTCCTCT
ATTTGAATCTTTGACTCCATGGGAATTGGGGATCCCCTATGGGATCCCCCCCTATAGTGA
G
GenBank Accession FR811448 [GenBank]
Graphic View Graphic view of gene At3g03740
Predicted Position of Insertion Chr3:937248 - go to primer design
BLAST e Value 1e-09
Hit Clone Code (BAC ID) F20H23
Hit Gene Code At3g03740 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation BTB-POZ and MATH domain 4
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37