SimpleSearch - Line and FST details


Line specific information

 
Line ID 512H01
Vector Used pAC161
Line Availability available as T3 set from NASC (N449141)
Segregation Analysis 50:49:39
Confirmed for Hit At2g17340
Parent of DUPLO pair none
Parent of pair(s) 712, 81892

Gene hit At2g17340

 
Sequence (A. th genome BLAST matches underlined) 
>08-K019929-022-512-H01-8409
NATGATTCTGTAGATTTCCGGNACAGTGAAGCCATCTACAATTGAATATATCCTGAATAT
ACTCTGGACACAGGCTTTTAAAAGCGAATCTAATTTTTTAGTCTGAATTTACAGTTGAAG
GATGATAATGGCCAATTGCTATGGGATCCTCCCTATAGTGAGACTATGGGATCCTCCCTA
TAGTGAGGTTATGTGAATCTCCATATCCCGGGTTACCCTGAATTGAGAACCCCCATTTGG
ACCTGAATGTAAACACACCAAAATAACCATTTCCTACTTCGAATAATTTCATTATTACTT
TCACCTCATACTACCCCAAAGCGCCTTTTTTCTTTTTTAACCCATGCACCTTCTTTTTTT
ATTAACTCTTTTTTTTTTTGTCACCCCCCCCCCCCAAAACCCTGGNAATTCCTCTTTCTC
TTTGCCCCAACCAGAAAAAAAAAAACAAA
GenBank Accession BX534861 [GenBank]
Graphic View Graphic view of gene At2g17340
Predicted Position of Insertion Chr2:7542285 - go to primer design
BLAST e Value 5e-28
Hit Clone Code (BAC ID) F5J6
Hit Gene Code At2g17340 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation pantothenate kinase
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX534860 [GenBank]


Last Updated on 10.06.2021 13:37