SimpleSearch - Line and FST details


Line specific information

 
Line ID 513B10
Vector Used pAC161
Line Availability available as T3 set from NASC (N449174)
Segregation Analysis 50:31:17
Confirmed for Hit At5g60230
Parent of DUPLO pair 7922
Parent of pair(s) none

Gene hit At5g60230

 
Sequence (A. th genome BLAST matches underlined) 
>74-K019923-022-513-B10-8409
TGATCTGTAGATTTCCCGGACATGAAGCAACGACCTTGAAGTGGATTTTGATGCATTTGA
GATTGTAATGCAAAAAGAAAGCTTCTTCAAAAGATAACTGAATCCATTTCTTGATTTTCT
CTGCCGATAGAACGAGTCTGCCAAAACAACAACGGTCAAGAAGCTCAGCTTGCTCTGGCT
CAACCCCTATGGGATCCTGNCCTATAGTGAGAGTATAGGATCTTCTCAATCTTGTGTAAG
CCTCCAATTTAGAAGATCTGTACCTCCACCGGATGGGTTTCTCTTGACTGTTTCAGTTAG
CTTTGGCCCTATGGGATCTCCCCTATAGTGAGAACTTCAAAGGAGAGGATGTGAATCTAC
TTGTATGTTTGGAGAACTTCACTGTGGAAGAACAAACGATAAGTAGATGGAGCCCAGAAC
TCAGTCGTGAAGATCAATCCACAAATTCAAAACAACATGTTCCCAACGTGAGTAATTTGA
ACACTCTTTGAGGAACCATTCTCGGTAACTCATGTCTGGTTTGAATTTTTCATATCAACT
TTAAATTAATTTCTACTCTATATAAAGATGAGTAGCATTTCTTTCAACTAATCTGCAAGA
ACAATCATCATCATGCATATGTAACATATCCAAAGAAGAAAACACTAAAAGCAAATTTAT
CATTACAACAACAGAACATTAAACCATTTAAGAGTAATAAAAACACAATTCCGAAGAAAA
ACTGTACCAAAATCTCCTTAAATTTGAAAATGACTATGG
GenBank Accession BX534889 [GenBank]
Graphic View Graphic view of gene At5g60230
Predicted Position of Insertion Chr5:24250617 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F15L12
Hit Gene Code At5g60230 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation splicing endonuclease 2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX534889 [GenBank]


Last Updated on 10.06.2021 13:37