SimpleSearch - Line and FST details


Line specific information

 
Line ID 514C03
Vector Used pAC161
Line Availability available as T3 set from NASC (N449275)
Segregation Analysis 12:8:4
Confirmed for Hit At4g25160
Parent of DUPLO pair none
Parent of pair(s) 8255, 8259, 8308

Gene hit At4g25160

 
Sequence (A. th genome BLAST matches underlined) 
>19-K019924-022-514-C03-8409
TGATCTGAAATTTCCCGGACTGAAGCCATTTACATGAAGCCAACTGTGTAGCGTTTTTGT
GGATATATAAACGGCAAGACGTTTTGCTTTGTACTACTACTACACACATGCTGAATCAAA
AATATAAACCGAAACGAAACCTTAATCATCTTGTAAACGAATATTCGGATCCATCCGTTA
ATTTGCCTCCAAATAAGAACACAAAACCATTGCCCTTTATTTTTCATTTTGGTATTTTGG
TCTTTTTTGTCTCTCTTCCTTTCCATTGCCCAAAAAGAAACAGAAACTTTTCTCCGAGAA
TCCTCATTTCTCCGTTGAAAAAAGGACCTTGAGAGGAAATGTTTCACTGTTCCTATGGGA
TCCTCCCTTATTAGTGAGACNGTNNNATACTCCCTAAAAAATCTGATCTTGCAAATCACG
TCTATCTTTCCCGCGGAACTCTGTACAACACAAAGCTAATGCGGCCAATTCCCGGGTTTC
TTCAATCGGCCAGTTACCGGCTTTCTGATCTAAGATCTTAAGGAACTCATCATTACTATC
CATTGCGCTCTCAACGAAATGTGTCAATGCAATAGCAGGTTTTGCTGTGAGAAGCTGAAG
AAGAATCATTCCCAAGGAGTAGATATCTGATTTCGATGATATCCTTCCAGGGCGCTGATA
TTCCGGATCAATATANCATAACGTTCCCACGGGGCTTGTTTGGTTGTATATAGGGAATTT
AGTTGGTGGAGGATCGACTTGAACCCTCGGTGGAGAGTCCCACGTCTCCAACTTTGTTGA
AAAGGTGGGGATCAAGCAAAATGTTTGCAGGTCTAAGAACACGGGGGAAGGATTGGTTAA
GGGCTTGATTTGGGGGAGGAAACAAAAGCCGTTGCAATTTCCCA
GenBank Accession BX535005 [GenBank]
Graphic View Graphic view of gene At4g25160
Predicted Position of Insertion Chr4:12903395 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F13M23
Hit Gene Code At4g25160 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation U-box domain-containing protein kinase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX535006 [GenBank]


Last Updated on 10.06.2021 13:37