SimpleSearch - Line and FST details


Line specific information

 
Line ID 516H06
Vector Used pAC161
Line Availability available as T3 set from NASC (N449530)
Segregation Analysis 50:46:43
Confirmed for Hit At2g41150
Parent of DUPLO pair none
Parent of pair(s) 12782

Gene hit At2g41150

 
Sequence (A. th genome BLAST matches underlined) 
>48-K019946-022-516-H06-8409
TATCTGAAATTTCCGGACATGAGCCATTTACAATTGAATATATCTTACGCTATTATCGCC
ACTGTGCACCATTGCTTGCTAATCAGGATTATTTTACGCGAGGATGTAAGCCGAGCTACA
TATTTCTTGAAGTGGCGGTCTAACTCCGAGTTATCTATGGTTATCCACCCCTACAATGCT
GTCGATTTCGTGATAAAATTCCTCAATCTTGGTACCCCGGACTTCAAAAAACCCTATGGA
ATCCCCCCCTGTAGGGAGAGGTGGACGTTTTGTTCGATGCGATCCACCATGTGCAGAGAA
AAAGGATCTCAAGAAAATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGGGGAACGAA
AACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTATGGGATC
TCCCCTATAGTGAGACTCTCTCTCCTTTGGATGTTCTTACATGGAAAGAGAGCTCTTGTG
CAATGAAATCACTGTATGATATTGATCTCCTCCCTGAGAAAATACCTGTGATCTTGGATG
ACTCGGAAACCTGCCACATAATGCTATCGACGAGTATGAAATTAAAAAATCGTGGGAGTG
CGCATGTATATGAGGCAAAAAGGCATGAGCTAAATGACACTATGGGACCTCCCGTCAAGA
GAAAACAACGCCGAAGAACGCGCGAGACTCGCTATGCGCGGCCCGGGACGCTATTCAAAA
AAACGGCACATCCGCCCCGGAATAGATAACACGGCCGTCTTATCCACGTCCGCGCCTATC
AACACCGCGAAGCTGAATAGAGGGTATAACAAGAGCAGGATGAAATCTATAATATATGAA
AACAAAAAAGAGAAATATA
GenBank Accession BX535330 [GenBank]
Graphic View Graphic view of gene At2g41150
Predicted Position of Insertion Chr2:17154131 - go to primer design
BLAST e Value 8e-73
Hit Clone Code (BAC ID) T3K9
Hit Gene Code At2g41150 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation plant/protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX535331 [GenBank]


Last Updated on 10.06.2021 13:37