SimpleSearch - Line and FST details


Line specific information

 
Line ID 517C11
Vector Used pAC161
Line Availability available as T3 set from NASC (N449571)
Segregation Analysis 60:23:23
Confirmed for Hit At2g17320
Parent of DUPLO pair none
Parent of pair(s) 81891, 81892

Gene hit At2g17320

 
Sequence (A. th genome BLAST matches underlined) 
>83-K019969-022-515-C11-8409
TTTCCCGGACTGAAGCCTTTACATTGAACCTCGCCTGCCCTTGAAAGAAATTCGAACCTA
GACTTTCTTGAATATGTCCCTAAATCCTAACTCTCTGAGTAAATGCTCACGAACTCAGCC
GATAATCTGAAAACAAGCCAAAATAATCCATGAAAACAAAACTCACTACATCAAAGAGAA
AGATCATAAGGTGTTTTCTACTTACAACACCATCTGGTGGCCCACCATTACTCTCTGGAT
CTTTCTTCCAGCCTTCAAGAAATCCCGCATATCTTCCAGATTCGAAGTAAGACATATCAT
ACGCAAACCACAGGACACAAAACTCGTCTATGGGATCTCCCCATATAGTGAGAGATCCCC
CCAATAGTTGAGATAANNTNTAACATGCATCCTAATAAGGCCTTCCGGGATCGCGCCTGT
AATGGACATTTGACTTCAGACACTGGCTCCTTAAGATCTCTATAGAGCATAATCGTGCGT
AACCCTACCATGAGGCCTAACATGATCGTCCAGAAATTTAATCATTAGATACTTTGTATA
AATAGCTCGGAAGGACATTCGGCTCAGTCTGTCAGGCACTCTAGAGAAAACCTCTACTTA
AGACTGATTACCCATCGGATACGGCGCACCCNGAAAGATCTCCCGGGTGTCCCCCCCCCT
AAGGGGGGGTTACCCCGGGTTGCCCGCCACCTNAAAAATGGATGGAATGAGCTATATATA
GTAGAGCTTACTTAGCTAGG
GenBank Accession BX535150 [GenBank]
Graphic View Graphic view of gene At2g17320
Predicted Position of Insertion Chr2:7534959 - go to primer design
BLAST e Value 2e-147
Hit Clone Code (BAC ID) F5J6
Hit Gene Code At2g17320 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation pantothenate kinase
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX535150 [GenBank]


Last Updated on 10.06.2021 13:37