SimpleSearch - Line and FST details


Line specific information

 
Line ID 517F04
Vector Used pAC161
Line Availability available as T3 set from NASC (N449600)
Segregation Analysis 50:8:5
Confirmed for Hit At1g54370
Parent of DUPLO pair 2370
Parent of pair(s) none

Gene hit At1g54370

 
Sequence (A. th genome BLAST matches underlined) 
>30-K019945-022-515-F04-8409
TGAGCATTTACAATTGGCCTTTTCTCTATTGTATCCTCATTTACTGATCGTCAGTGATTG
TATGCAGTGTTAGTCAGTGTTGTAAATCCTTGACTTTACCTTTTGCTTCTGCGTTTCATG
ACTGACATCAGTTGTTTATTGGCGTGCCTATGGGATCTCCCCTATAGTGAGANACTCTGT
GACNCNCGGTCTCCTTTGTATATGCAAGATGAAACGACTATACAAACACCCCTTAAACAA
CGTTCAACCTCCGAGACCTACCCCTCTGCCCTATCCCAAACTATGCTCCAACAAGCCATT
CGCACTCCCTCCCACAGTGAGTCCACCAACCTATAACATCCTCCCGATAGTAAGAAAAAA
ATACCTATGGGATCCTCCCTATATCAAGCCCCCATTTTTACCCTATTTCATAAACCCAAG
GACGCGATCGTATGGATATGTAAAAGACCGGATTTCC
GenBank Accession BX535194 [GenBank]
Graphic View Graphic view of gene At1g54370
Predicted Position of Insertion Chr1:20294478 - go to primer design
BLAST e Value 8e-67
Hit Clone Code (BAC ID) F20D21
Hit Gene Code At1g54370 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation sodium hydrogen exchanger 5
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37