SimpleSearch - Line and FST details


Line specific information

 
Line ID 517H08
Vector Used pAC161
Line Availability available as T3 set from NASC (N449628)
Segregation Analysis 50:40:27
Confirmed for Hit At4g16141
Parent of DUPLO pair 12134
Parent of pair(s) none

Gene hit At4g16141

 
Sequence (A. th genome BLAST matches underlined) 
>64-K019945-022-515-H08-8409
GATCTGTAATTTCCCGGACTGAAGCCATTTACATTGAATATATCCTGGATCAGTAGAATA
TGTCTCTGGTCTGATCATGAATTGACTTTGGTATGCAGGATTGGGCATTGCGCGTGGTAT
CATGAGCATAAATATGAAGAAGCTTCTCTTGGAATTAGACATGATGCTATTAAAATCAAG
AGCAAAAGTAATAACAATCTTGGTCTTGAGAGCCGAAATGTCAAGACCGGAAAAGGCGAA
CCAGTTAATGTTAAGATTGCCAAATGTGAACCGGGAATTGTCAAGATTGCCAAAGGTGAA
CCAGGAAATGTCAAGAACAAAATCAAGAGAGATCCTGAGAATTCCAGTAGCAGCAATAAT
AACAAGAAGAACGTGAAAAGGGTTGGTAGATTTTTGGATTTTGGGTTTAAGGTACCGGCG
ATGAAGAGATCGGCTGTGGAGAAGAAGAGGCTATGGAGGAAACTTGGGGAAGAGGAACGA
GCCGCAGTACTTCTCTGGNCTTCCTTTCGTGTGGTTGAGATTTTGTCTCTTAACCCTTTT
TTTTTGATGTGTCGTAATGGTTGAGTGAAAGAGATTAGGGAAAATAAGTTAGTGAGGAAA
TGATGAAGAGAGGATTATTAATCCTACTTATCATATATATTAGTTAATGTAATTTTAGAG
GCAAGCTAATGTTATATGCCATCTACTAATTAATTATTCGTATGAACTCTGGTTTAGTTG
ATTAATGATCATTTTCTTTGAAGTTGAATGATTTGAAATATGTCTCTTATTCTTAATTGT
TCGCTTAAAGGTGGCTTAAATGATCTTTTATTAGTTCAAAATTGTGATTTTAAGGA
GenBank Accession BX535227 [GenBank]
Graphic View Graphic view of gene At4g16141
Predicted Position of Insertion Chr4:9132330 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) FCAALL
Hit Gene Code At4g16141 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation GATA type zinc finger transcription factor family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX535227 [GenBank]


Last Updated on 10.06.2021 13:37