SimpleSearch - Line and FST details


Line specific information

 
Line ID 518A09
Vector Used pAC161
Line Availability available as T3 set from NASC (N449641)
Segregation Analysis 50:36:31
Confirmed for Hit At3g49720
Parent of DUPLO pair 2230
Parent of pair(s) none

Gene hit At3g49720

 
Sequence (A. th genome BLAST matches underlined) 
>65-K019948-022-518-A09-8409
TGAGCCATTTACATCTGATATATCCGGATAACTTTAGCTCTCTGCTGACCAAGAAGACCT
ATNGGATCCTCCCTATAGTGAGAGANAATATCCGTTTTACTTTCCACTTTTTTTTGACTT
CGAAAATGTATATGTCTCCTCCCTATATTATACGACCTNCNCCTTTCTCCCCAATCACCT
TTCAAACTACATTCCCCTATTATTTACCTATCCCTTCAACTCTTTCTTTCATCTTTATTA
CACCCCCCGATCCATTTTCACCTCCTCCTCTTGTATACTTCAATAAACTTTCACTTCACA
TTTTTTTTACTACCCTTAACTCTCCTTATACATAACATCAACAACCCCCCTTCTATACCT
TTTCCTCTCTCTATCACTACCCCCCATCCAATCCACCTTAACTATCTTACATCTCACCAC
ACTTCCCTCTCTTCTCCCTTTAATCACTCTCCTCTCTTCCGCGGTTACCTTTCCACAATT
AATACTCCCCTACACCTAACATTACCCTATATACAACACTCTTCCTACCACCTCTATTCC
CTTTTCACCCCTTCCCTCTCCCCCTCTCTATTACTTACTATCCCCCCCCCACTTCTTACT
ATATCAGTATACTCTCTATTTTTATATTTTTACATCATATTCGCCACACACCTCGTTCCT
CCTCCCCTTTCCATTTTTATTCATTCCCACTCTTCTCAACCCCCTCCATTCTACTCTATC
ACTCTATCATTTCCCACCTCGCCCTAACCCTTTATCCACCATCTTCCACCTTCAA
GenBank Accession BX535458 [GenBank]
Graphic View Graphic view of gene At3g49720
Predicted Position of Insertion Chr3:18440624 - go to primer design
BLAST e Value 4e-04
Hit Clone Code (BAC ID) T16K5
Hit Gene Code At3g49720 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation transmembrane protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37