SimpleSearch - Line and FST details


Line specific information

 
Line ID 518D01
Vector Used pAC161
Line Availability available as T3 set from NASC (N449669)
Segregation Analysis 50:6:6
Confirmed for Hit At4g31000
Parent of DUPLO pair none
Parent of pair(s) 58746, 92429, 92430, 92431

Gene hit At4g31000

 
Sequence (A. th genome BLAST matches underlined) 
>04-K019948-022-518-D01-8409
AAGCTTGTAGATACATTCTACACATCATTCTCCAAATTTTCGTACATGGTTGAGTCTATG
TGATTCATTTACTAGGTCTTAAATAAACATCCAGCTTTTACTACTCTTCTCTCACGTGTG
AAGAGGCGAGTGAATCTGCCAGCGGAGCATGACATGCATTGCTACTTTATCTGACCTATT
TTCTCTATGACCCCTCTTAAGTATTTCTCCTACGACCAAGGGATACAGATGGTGTTTTTG
CGCCTTTTACTCCTGACAAAAAGAAATTGCTGTTATGAGAATTGTGCTAAATTTAGCATT
TGCCTCTACTAACGCTCCTTACTTTGACTATACGCCGAGGATTCTGAGGACTTGTAATTA
CGACGAGACCTGGGAGAACTGTACTAGATCACATCGTTATTTTTACAAAAAATATTCTTC
GGAGATATTTTTCGGTAATAAAAATCGGTCCAATGATCTTTTTTATAGACCCCTTACTTT
GAGCTAGCCCCTTCGGACATAACAAACCTCCTGGGATCGCCCCCCATTAAGGGGAGAAAA
GGAAGGAGTTGTAAATGGCCCGCGGAGCACCACAGTTTCCGGAGCGGGTGTGGATTGCTC
ATCTTCGGAGATATCACCAAGAGAGTTGGGGGTGTAAATGGCCGGACTCCACAGTTTCAG
AGAACCAGCTCC
GenBank Accession FR811558 [GenBank]
Graphic View Graphic view of gene At4g31000
Predicted Position of Insertion Chr4:15105619 - go to primer design
BLAST e Value 5e-28
Hit Clone Code (BAC ID) F6I18
Hit Gene Code At4g31000 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Calmodulin-binding protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit T26N6

 
Sequence (A. th genome BLAST matches underlined) 
>04-K019972-022-518-D01-8409
TATTAATTTATATAATCCCATATATATAACTAACCCCTTTAAAGAAAAAAAACATTCT
GenBank Accession FR811559 [GenBank]
Graphic View Graphic view of sequence FR811559 of line 518D01
Predicted Position of Insertion Chr4:2216017 - go to primer design
BLAST e Value 2e-09
Hit Clone Code (BAC ID) T26N6
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37