SimpleSearch - Line and FST details


Line specific information

 
Line ID 518D10
Vector Used pAC161
Line Availability available as T3 set from NASC (N449678)
Segregation Analysis 50:14:11
Confirmed for Hit At3g47250
Parent of DUPLO pair none
Parent of pair(s) 3221, 7052, 83133, 83137

Gene hit At3g47250

 
Sequence (A. th genome BLAST matches underlined) 
>76-K019972-022-518-D10-8409
CTGAGGAAACCATCCATTCTTGACAGAGGAATGTGAAGCTTGATCTTCTTTACTTTTAGA
TCTAGGATTGATGCATCCTCACTCCTTATACCAGCAACTTTGTCCCTTGGAGGATAAGGC
GTTTGGCCGACAGTATCAACGGAAATGTAGACTCTGACGATGATACTTCTCCGGATTTAC
CCTTAGAGTGTTGAAATTTCGAGGATGGTGTTGTTTCTGATTCACCCATAGATCTCATGC
TATGGGATCCTCCCTTATAGTGAG
GenBank Accession BX535497 [GenBank]
Graphic View Graphic view of gene At3g47250
Predicted Position of Insertion Chr3:17400545 - go to primer design
BLAST e Value 6e-77
Hit Clone Code (BAC ID) F13I12
Hit Gene Code At3g47250 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation transmembrane protein, putative (DUF247)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At5g48750

 
Sequence (A. th genome BLAST matches underlined) 
>76-K019948-022-518-D10-8409
TATCTGAAATTTCCCGGACATGAAGCCATTTAATAGATTTGTCGGCAAGGAAAAACAACG
ATTCACGAAAAAGAAAGGAAAAATAACGATTCACAACTACACTTGGAATTGGAATCGTGT
ATTCTTTATAAATATAGACCACTATGTGCCTCTGCCCGATAATGCGATTGGACGACAGTA
TCATACGGAAATGTAGACTCTGACGATGATACTTCTCCGGATTTACCCTTAAAGAGCTGA
CATTTCGAGGATGGCGTTGTTTCTGATTCACCCATAGATCTGATCCTATGGGAGCTGCGG
CTATAGTGAGAATATAGGGAACCATGTTTTGACATTTTTTCCC
GenBank Accession BX535496 [GenBank]
Graphic View Graphic view of gene At5g48750
Predicted Position of Insertion Chr5:19771031 - go to primer design
BLAST e Value 2e-52
Hit Clone Code (BAC ID) K24G6
Hit Gene Code At5g48750 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein
Insertion Classification 5' region
Confirmation Status unknown


Last Updated on 10.06.2021 13:37