SimpleSearch - Line and FST details


Line specific information

 
Line ID 518H09
Vector Used pAC161
Line Availability available as T3 set from NASC (N449725)
Segregation Analysis 50:49:42
Confirmed for Hit At3g08900
Parent of DUPLO pair none
Parent of pair(s) 2105, 8147, 79052, 79056

Gene hit At3g08900

 
Sequence (A. th genome BLAST matches underlined) 
>72-K019948-022-518-H09-8409
GATCTGAAATTTCCCGGACTGAAGCCATTTACAAGCAATCATCATCAATGGTGTAGATGT
ACTTCTTTTTGGAGACCATGTAACCGAAGCAACGACAAGCAGAGTCCTTGAAGGAAATGC
AAGAGGCCTTGGGACCCAAGATTCGATTGATGTCGTTCCTGTTGTAGAGCTCGTAGTCAA
ACCCTACTGGAATGTTGATGACTTTCGAAGGATCACCATCTTGAACAATGATCAAATGAT
ACTGCTCAAAGAAAGGTCGCCACATCTCAAGGAAGTCGAGGTTTCGAATCGTAGGTATCA
CAATGCCTATGGGATCTCCCTAATTAGTGAGATGATGGCATTTGTAGGAGCCACCTTCCT
TTTCCACTATCTTCACAATAAAGTGACAGATAGTCTGGGCAATGGAATCCGAGGAGGTTT
CCGGATATTACCCTTTGTTGAAAAGTCTCAATTGCCCTATGGGATCCTGCCTATAGTGAG
AGNTATATGCAGGNATGTTGATGCCGNCNTGACCATTCCCAAAGGAACTCTTTTTCCTAT
GTGTGGTATGAACCTTGCTTTTGACCCTGAGCTGATTGGTCCGGCTACGTACTTTGGGCC
TATGGGATCCTCCTGTATTGAGAATCCCCCCTAAGATGAGGCCCCCTTATATGATCCTCC
CTATAAAAAGACTCCGCAACCGATCTCCCTGGCCTGAATTCAAATGATTGGCGAACCGGA
GCCAGAGGGACAATTGCCCTTATCTTCTTTCCGCTGGAAGGTGCTACCAATTTTATAACC
TTTAACAAACTAAGAAACACACCATCCCGATTAAGCTCTTCATTTTTCCCCCTTTTATT
GenBank Accession BX535550 [GenBank]
Graphic View Graphic view of gene At3g08900
Predicted Position of Insertion Chr3:2709386 - go to primer design
BLAST e Value 9e-153
Hit Clone Code (BAC ID) T16O11
Hit Gene Code At3g08900 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation reversibly glycosylated polypeptide 3
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX535550 [GenBank]


Last Updated on 10.06.2021 13:37