SimpleSearch - Line and FST details


Line specific information

 
Line ID 519C04
Vector Used pAC161
Line Availability available as T3 set from NASC (N449756)
Segregation Analysis 100:89:77
Confirmed for Hit At5g38120
Parent of DUPLO pair none
Parent of pair(s) 5784, 5814, 5824, 5844, 88760, 88765

Gene hit At5g38120

 
Sequence (A. th genome BLAST matches underlined) 
>27-K020206-022-519-C04-8409
AAATGCGACTCTTCTTATTTTCTTATATGGTGCCACCATGTTTATTACATTAACAAAAAT
TAATAACCTAAAATTACAAAATTTTATATAATTGAACTTAGTTATGCATGGCTTTGATCA
TTAAAGCACCTGTTTAGAAATAAAGTCGATAACCTTTTTCTCACAAAGATTACTCTCAGG
CTTTCGTGCTACGTAAGCCATCGGAAATTGTCCTGCTTCTTTATCTGGAAACCTTTGCCA
TGCAACAAATCAAAAATTCAAACAAAACAAAATAAACTTCTTGTCGTTTTTATGTTTAAA
AGGCAAAAATCTTGGAAGTCTTAACAAGGAAAAGAAAAATGATAGTAAAACTTTACGGAA
TAACGGCTGCATCGAGAATATCTGGATGGTTTAGTAAGAGAGCCTCTATGGGATCCTCCC
TATAGTGAG
GenBank Accession BX535584 [GenBank]
Graphic View Graphic view of gene At5g38120
Predicted Position of Insertion Chr5:15216072 - go to primer design
BLAST e Value 3e-127
Hit Clone Code (BAC ID) F16F17
Hit Gene Code At5g38120 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation AMP-dependent synthetase and ligase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37