SimpleSearch - Line and FST details


Line specific information

 
Line ID 521D01
Vector Used pAC161
Line Availability available as T3 set from NASC (N449957)
Segregation Analysis 50:24:18
Confirmed for Hit At5g57580
Parent of DUPLO pair none
Parent of pair(s) 3376, 3624, 3763, 92431

Gene hit MRI1

 
Sequence (A. th genome BLAST matches underlined) 
>04-K020048-022-521-D01-8409
ATATTTAGCTGGGGATCAATAAAATACACGCTCACATAAACTATTGTTGGAAATCAAATG
ATAGCCTATGGGATCCTCCCTATAGTGAGAANNATTNNT
GenBank Accession BX535789 [GenBank]
Graphic View Graphic view of sequence BX535789 of line 521D01
Predicted Position of Insertion Chr5:23364188 - go to primer design
BLAST e Value 4e-18
Hit Clone Code (BAC ID) MRI1
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At5g57580

 
Sequence (A. th genome BLAST matches underlined) 
>04-K020205-022-521-D01-8409
ATATTAAACGTGACAAGGATGGAAGACTACTCGAAGTCCTGGAGATTAGAATCTAACCTA
ATCTATGGGATCCTCCCTATAGTGACGGCATTGAATGCTCGATGACAGCACTCGAATAAT
TTTCCATATTANTGGGAATAATACTCAACCTCTGGGGCTGCTTCAAGTCTAAAAGAGATT
TTCCATCATACTCTATGGCTATGGGATCCTCCCTATAGTGA
GenBank Accession BX535790 [GenBank]
Graphic View Graphic view of gene At5g57580
Predicted Position of Insertion Chr5:23315580 - go to primer design
BLAST e Value 2e-32
Hit Clone Code (BAC ID) MUA2
Hit Gene Code At5g57580 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Calmodulin-binding protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37