SimpleSearch - Line and FST details


Line specific information

 
Line ID 522A03
Vector Used pAC161
Line Availability available as T3 set from NASC (N450019)
Segregation Analysis 50:46:43
Confirmed for Hit At1g01420
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At1g01420

 
Sequence (A. th genome BLAST matches underlined) 
>17-K020204-022-522-A03-8409
ACTTGATTCTACCAAATCCTTACCGGTTATGGGGACACGACCGGGAATAATAACCGGTTC
GGTTAATTCCCTAAACTCACACGACACCGTTTCGTCTATGGGATCCTCCCTATAGTGAGA
GAAGCTGGGACGTTTACTGCCAGAA
GenBank Accession BX535880 [GenBank]
Graphic View Graphic view of gene At1g01420
Predicted Position of Insertion Chr1:155305 - go to primer design
BLAST e Value 2e-38
Hit Clone Code (BAC ID) F6F3
Hit Gene Code At1g01420 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation UDP-glucosyl transferase 72B3
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At4g11380

 
Sequence (A. th genome BLAST matches underlined) 
>17-K020049-022-522-A03-8409
GGGACTCGGCCTTGAAAAATAACCTTTTCGGTTAATTCCCTAAATTCACACGACACAATT
TCGCCTATGTTATCCTCCCTTTAGAAAGAGGAAATGGCAATTTTATTTCGGGAAAAAAAC
TTGTTTGTGGGGGATTAAATGTTGGCTCTCTCCTCTTGGGTTATGGAATTTGCAGGATGG
TTTTATTAACCGCCACTGTTGTTGGATTTTGGGGAAAATAAAAGCAAACAATGCCTATGG
AATCCTCCATATAATGAGCAACCGGGACAATAGCGGCATTATCCAATCCCATCAGGTCAC
CTATGGGATCCTCCCTATAGTGAGANNNNNNNNNNN
GenBank Accession BX535879 [GenBank]
Graphic View Graphic view of gene At4g11380
Predicted Position of Insertion Chr4:6924797 - go to primer design
BLAST e Value 7e-17
Hit Clone Code (BAC ID) F8L21
Hit Gene Code At4g11380 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Adaptin family protein
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37