SimpleSearch - Line and FST details


Line specific information

 
Line ID 523D03
Vector Used pAC161
Line Availability available as T3 set from NASC (N450151)
Segregation Analysis 50:9:7
Confirmed for Hit At3g13560
Parent of DUPLO pair none
Parent of pair(s) 7074, 8213, 8236

Gene hit At3g13560

 
Sequence (A. th genome BLAST matches underlined) 
>20-K020210-022-523-D03-8409
AACCATTTACATTGAATATATCCTGACAATGAAGACAATCGGTCAGGACCATTCTCTGAA
AGAAACTGGGGGATTTTGTTTCCAAATGGGACCTCGGTTTACCCTCTGAGTTTGAGTGGT
GGCCCTATGGGATCCTCCCTATAGTGAGATNNNNNNAANNNNTCTNTTCCATATGTACTT
TAATTTTAAAACATCACTGCACACATCTATTTTTTTAAAAAAATAAAATACTTTTCTATA
CAACTACTATTTACTACTCCTTATATTTATATTTCAAAACTATAAACAAATTATTTTAAT
TCCAAAATCTTTATTTCAATTTATCTACATTCACCTCCAAATTAAATCTACCAACTCATT
ATACCTCACTATAANAAAAATCCCATATTCTCAATATAAAAATAATCTTTTTCCCTCAAA
TTAATATTAATCCCTTATTAATAAAATTTTCCATATAC
GenBank Accession BX536069 [GenBank]
Graphic View Graphic view of gene At3g13560
Predicted Position of Insertion Chr3:4426238 - go to primer design
BLAST e Value 9e-44
Hit Clone Code (BAC ID) MRP15
Hit Gene Code At3g13560 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation O-Glycosyl hydrolases family 17 protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX536068 [GenBank]


Last Updated on 10.06.2021 13:37