SimpleSearch - Line and FST details


Line specific information

 
Line ID 524C10
Vector Used pAC161
Line Availability available as T3 set from NASC (N450242)
Segregation Analysis 50:48:48
Confirmed for Hit At3g28050
Parent of DUPLO pair none
Parent of pair(s) 7254, 9906, 9926, 84788, 84794, 84799, 84806, 84810

Gene hit At3g28050

 
Sequence (A. th genome BLAST matches underlined) 
>75-K020209-022-524-C10-8409
ATCGTTTGCTCGGTGAGAATATAATTACACTCATGTGTTTTTCCCTATGGGATCCTCCCT
ATAGTGAGAATAAACGAATTAAATTTATCTATATAAGAATAGAAAGACTATGGCATATTC
CCTATAGAGAGAGAAAGCAAATTAGGGTACTTTCCCATAAAAAAACAAATTATGATTCGA
CTCCTCTATAGGTGAAAGCAAAAAATAAATTTTTAGTTAATCAGAAATGATTATTTATAT
TTGTCAACATCTACGACCATATAAAAAATACTTATTTAATATAACTGATAATAAAGATGA
TTTTTTATTTTTAAAAAACGAGAAGACAATTATTATTTAATATGAAAATATAAAAAATTT
ATATAAAGGGTCTGAATTCCAAATAAAAACACGCAATAGTGTTTTTAATAAGGAAAAACT
ACGAAATATAATAGAGTTTCT
GenBank Accession BX536187 [GenBank]
Graphic View Graphic view of gene At3g28050
Predicted Position of Insertion Chr3:10444543 - go to primer design
BLAST e Value 4e-18
Hit Clone Code (BAC ID) MMG15
Hit Gene Code At3g28050 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation nodulin MtN21 /EamA-like transporter family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit T11I11

 
Sequence (A. th genome BLAST matches underlined) 
>75-K020217-022-524-C10-8409
TTGCTACCTCCAAATATTTTTTCAGTATTATGTTTTCCTCCCTGGGATCCTCCCTACCCT
GAGAATAGATGAGTTAAATTTCCTCTATATCATAATACAAAGGCTATGGGATCCTCCTTA
TAGTGAGAAATTTCATTTTTTTGTATTATGCAATTTTCTTTTTCAAGATTATTCAAATGC
CTCCCAATTGAGATCCCCAACTTCTATGTCCTTCACTATATGAAGAATATCTGGTGGTCA
TATAATAATACCTTTCAGAAACTATCCATGTAATAAGACTGCTAAATCATTTGTTTTAAT
ACATAATTACTATGAAATGTAAGTTAATTTATTTATTTAGGAGATTTAACATTTTGATTA
CGGGTCCCCATTCCACAAAGAGACCTTGAATAACTTTCTTATTAAGGAAAAATTTTGTTT
TTTAATAAAATTTGTTGGCATGGCCATGGTCCATCCATGCACGGTGGGCCTTTCTCTTCT
AT
GenBank Accession BX536188 [GenBank]
Graphic View Graphic view of sequence BX536188 of line 524C10
Predicted Position of Insertion Chr1:29371818 - go to primer design
BLAST e Value 6e-113
Hit Clone Code (BAC ID) T11I11
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37