SimpleSearch - Line and FST details


Line specific information

 
Line ID 527F08
Vector Used pAC161
Line Availability available as T3 set from NASC (N450564)
Segregation Analysis 50:31:17
Confirmed for Hit At5g38390
Parent of DUPLO pair none
Parent of pair(s) 4076, 4212, 7259, 94650, 94661, 94671, 94686, 94693, 94699, 94704, 94710, 94712, 94714

Gene hit At5g38390

 
Sequence (A. th genome BLAST matches underlined) 
>62-K022478-022-527-F08-8409
ATAAGCAAGGTCTAATTATGGTTTCTCTTGTTATGAGGTGCTTTCTCTATGCTGTGAATC
GATGCCAGTGTTCAAAAACCTCAAATCTTTGTCTATCAAGAGTGCCGAGAATCGAGGATG
GCAAGCAATGCCAGTTCTTCTAAGGAACTGTCCGCATTTAGAAACCCTATGGGATCCTCC
CTATAGTGAGACTTATTAATCCCCCCTTTAGAGGAGCTTGCTTATTCTCGCTCTTACTCG
ATCTATATTTTCTACAAAAAAAGCTAGAGGGAACCTCCCTATAATGAGGCTTATTGAACT
CCGCCTTAGGAGGGGCAGCCACAACAAAACCAGATGGGAATATGCGGACAACATTAGGTG
GATGCACTGACGGACGAGGGGGAATAAAGAAATAGAGAAAAACTAAGCTAGGAAACCATT
GAGTAAGGAGGAAAGACGAGGTGGTATGACAACCCAGTAGGGGAGAGTGAAGATGAAAAA
AGA
GenBank Accession BX650017 [GenBank]
Graphic View Graphic view of gene At5g38390
Predicted Position of Insertion Chr5:15367464 - go to primer design
BLAST e Value 6e-85
Hit Clone Code (BAC ID) MXI10
Hit Gene Code At5g38390 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation F-box/RNI-like superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX650018 [GenBank]


Last Updated on 10.06.2021 13:37