SimpleSearch - Line and FST details


Line specific information

 
Line ID 532B11
Vector Used pAC161
Line Availability available as T3 set from NASC (N450999)
Segregation Analysis 50:46:45
Confirmed for Hit At5g09870
Parent of DUPLO pair none
Parent of pair(s) 5447, 5448, 5451, 5532, 5560, 5576, 10367, 10394, 96724

Gene hit At5g09870

 
Sequence (A. th genome BLAST matches underlined) 
>82-K020373-022-532-B11-8409
GCCATTTACATTGAATATTCCTGTCCGGGACATGCATGCATGTCGACCCTATGGGATCCT
CCCTATAGTGAGCCTCCATAACCATACCAAATAGGACAATGTCTGCTCAAGAAAATCTCA
ACAGACCCGAGCGCCCACCGAAGAACTTGATGAAGACGGTCAGAAAGATTGATAGGTGCT
GATCCTTTAAAGGCCGGTATCTTAGGTGTACAGTAAACCGATCTCCAGCCATGAGAATGC
ATCTTGAAACCCGTAAGGATATCCTCGGTGACAGAACCGTAGATCCACCCAATCTTGAAT
AAATTTCACAAACACCATGAAAGAAATCAAAAACCATATCGCAAAATGAAAGATAAAGTG
CTAAAAAGTGTTTTAAAGAGCTCTACATTACCTCTTTTCCCCATTCGGTTTTATCTTCGT
ATCCACAACTAATGACTTGGATGGCTTCTCTAAGCAGAGAAGCTGGACTCGCATTCCTAT
GGGATCCTCCCTATAGTGAGNNNNNNNNNNNNNNNNNNN
GenBank Accession BX546656 [GenBank]
Graphic View Graphic view of gene At5g09870
Predicted Position of Insertion Chr5:3077181 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) MYH9
Hit Gene Code At5g09870 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation cellulose synthase 5
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CU589480 [GenBank]


Last Updated on 10.06.2021 13:37