SimpleSearch - Line and FST details


Line specific information

 
Line ID 532E08
Vector Used pAC161
Line Availability available as T3 set from NASC (N451032)
Segregation Analysis 50:49:39
Confirmed for Hit At3g19600
Parent of DUPLO pair none
Parent of pair(s) 83671, 83673, 83674, 83675, 83676, 83677

Gene hit At3g19600

 
Sequence (A. th genome BLAST matches underlined) 
>61-K020373-022-532-E08-8409
AGCCATTTACATTGAATATATCATGTAGATTTCACATGAAGAAGCTTCACCTTGTCCTTG
ACTTGGACCTTACGCTTATCCACTCCGTTAGGGTTCCATGTCTCTCCGAAGCAGAGAAGT
ATCTAATCGAAGAAGCTGGTTCAACAACAAGGGAAGATCTATGGAAAATGAAAGTCAGAG
GAGATCCCATATCCATAACCATAGAACACTTGGTAAAACTACGGCCATTTCTTTGCGAAT
TCTTGAAAGAAGCCAACGAGATGTTCACAATGTATGTTTACACAAAGGGTACTCGCCCTT
ACGCTGAAGCCATTTTGAAGCTGATTGATCCGAAGAAACTCTATTTTGGACATACAGTGA
TAACCAGAATTGAGAGTCCTCATACGAAGACACTTGATATGGCTTTGGCTGATTATCGGG
GACTGGAGATTTTCAATTATAGATGGCTTCCTGACCAAGAAATCTACATGGATCTACGGT
GAGAACCATGGACGGTGTGTAGAAAAAAAAACACTAATTACCTGTTTTTTTTCA
GenBank Accession BX546672 [GenBank]
Graphic View Graphic view of gene At3g19600
Predicted Position of Insertion Chr3:6811489 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) MMB12
Hit Gene Code At3g19600 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RNA polymerase II carboxy-terminal domain phosphatase-like protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37