SimpleSearch - Line and FST details


Line specific information

 
Line ID 535E08
Vector Used pAC161
Line Availability available as T3 set from NASC (N451320)
Segregation Analysis 50:30:24
Confirmed for Hit At3g46500
Parent of DUPLO pair 12190
Parent of pair(s) none

Gene hit At3g46500

 
Sequence (A. th genome BLAST matches underlined) 
>61-K020488-022-535-E08-8409
NNNCCGTACTAAATTCGGACATAAGCCATTTACATTGAATATATCCTGAAGCCATGTTGA
TTTTGGGATGTCTGATCCCTCAAACGGATAGTGTAATGGGGCTCCAGGTATTACGCGATT
TTCACCATAGTCATATAACTTTTGATGTGACCAGGTTTGGTTATAAAAATTTGTCTTATG
GCAGATATGCAAGGATAGAGACGTGAAGCCTATGGGATCCTCCCTATAGTGAGAANAANA
ANAAANANNANTTACCANTTTTTTTTCATTCCAAAATGCAAATGGCCCCCCCCTTATTAA
TAAANACCTATGGGATCCTCCCTATAGTGAG
GenBank Accession BX546893 [GenBank]
Graphic View Graphic view of gene At3g46500
Predicted Position of Insertion Chr3:17121643 - go to primer design
BLAST e Value 1e-67
Hit Clone Code (BAC ID) F12A12
Hit Gene Code At3g46500 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37