SimpleSearch - Line and FST details


Line specific information

 
Line ID 536H01
Vector Used pAC161
Line Availability available as T3 set from NASC (N451445)
Segregation Analysis 50:44:36
Confirmed for Hit At2g20470
Parent of DUPLO pair none
Parent of pair(s) 5080, 5126, 5157, 7484, 8613, 81230, 81231

Gene hit At2g20470

 
Sequence (A. th genome BLAST matches underlined) 
>08-K020490-022-536-H01-8409
CCGGACATCAGCCATTTACAATTGAATATATCCTGACTTCTATAGAATACTTGCGACTAT
GGGATCCTCCGCATCCCGAGACAAAATGGCTTCCTCTGGAAACTTCAGATGACTTTTCCA
GTTTACTATCTGCAACCAAAAGCAGGAACAAGAGTTTGATGTCATGTCAGTGTCACTGGA
AGGTTAACAAATTTCAATTCATTCTTGCGAAAATTACCTTTCTACAGGTTGACATAGGAT
CATCTGAATAAAACGGCGGATATCCTACTATGGGATCCTCCCTATAGTGAGATCTATGGA
ATCCCCCCTACACTTATCTACACTTATTTCTTCACGCCCCTTGAAACCTGATTGCGGAAC
CTAAATGATGGTACCTTTTGAATGAAGGACTAATTAGAATCGGACACATTTATAAGCAAA
TGCAATAAACAAATTATTCTAATTCAGGACTCTTTATTACGACGTG
GenBank Accession BX547030 [GenBank]
Graphic View Graphic view of gene At2g20470
Predicted Position of Insertion Chr2:8827363 - go to primer design
BLAST e Value 7e-97
Hit Clone Code (BAC ID) T13C7
Hit Gene Code At2g20470 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX547029 [GenBank]


Last Updated on 10.06.2021 13:37