SimpleSearch - Line and FST details


Line specific information

 
Line ID 539F12
Vector Used pAC161
Line Availability available as T3 set from NASC (N451720)
Segregation Analysis 50:32:32
Confirmed for Hit At3g32980
Parent of DUPLO pair none
Parent of pair(s) 75980, 75987, 75990, 75999, 76002, 76004, 76005, 76011, 76015

Gene hit At3g32980

 
Sequence (A. th genome BLAST matches underlined) 
>94-K020531-022-539-F12-8409
AGCCATTTACATTGAATATATCCTGTTAGATTATGTGTTCACTAATTAATTAGTCAACAT
ATATTGAAATCATAATGATATATAGTTTTTTCTTTTCATGATGACATATTTAGTATACCT
ACAAAAAGTGTTAGATTGCATTTTCATTCAATAAAAAGGTTTGTTCTTTTTAAGCAACGC
GTGGTGATATAGTGTAAACAAGTTAGTATACATTTTAGTTTACATTATATTAATCTTCTA
ACGCATAAATTCAACATTATGTTTTAGGTTAACAACTACATCGATCTGATCAACTTCCCA
TAAATAATACACGATTTATATAATATGTTAATATGTTATTTTGTAACATTCAATAAATGA
TTGATATAAACTCCTAACGTGTTTGGTACAGTACGGGTCCATGCTTTTCTTAAATTATTA
TACGGATAATTTACGTTCGTTGAATGGGAGATCAAATTATACTAAATGTTGTGAAATCAT
TTTTTTAAAAGGCATGAGTCATATTTGACGACAAGAGCTAA
GenBank Accession BX547321 [GenBank]
Graphic View Graphic view of gene At3g32980
Predicted Position of Insertion Chr3:13527822 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T15D2
Hit Gene Code At3g32980 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Peroxidase superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37